LOCUS LJ647997 3279 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68298.graph_c0_seq4.
ACCESSION LJ647997
VERSION LJ647997.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3279)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3279
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68298.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1047 a 546 c 639 g 1047 t
ORIGIN
1 tggcacgtta acatgaaaag ctttactcag gaggagcgct tggcgttttc ctccacggga
61 acaccatcgc ttgttttcct tgcagaaaaa ctcgagcggc tgaagggcta tgctcgctat
121 attagcaaaa atacgctaga caaaaagata gcagaggaag tcgccaagtt gctggagctg
181 aaggcacaat tgggggagga gaatggttgt cctcataaac tcatcctcaa aacgccaaaa
241 ggcacgaggg attataatcc agagcaaatg gcactgcgat tgggagtgtt ggagaaaata
301 atatcagtat tcaagcgtca cggcgccgag acgatagata cgcctgtatt tgagctaaaa
361 gatgtcttaa ctggtaaata tggtgaagac tcgaagctta tttatgatct aaaagaccaa
421 ggtggtgaga ttctcgcact tagatatgat ttgacagttc ctttcgcgag gtatctggcc
481 atgaacaaaa tttcttccat caagagatat cacattgcca aggtttatcg aagagataac
541 ccagctacaa cgaaaggcag atatagagaa ttttatcaat gtgatttcga cattgctggt
601 cagtacgatc cgatgctacc agatgtagaa tgcatcaagg ttgtatgcga agcgttagaa
661 gctctgaatc tgggatcata cttaattaag gtgaatcata ggtctctgct ggatggcata
721 ttcgctgcat gcggcgtacc acagagtaaa ttccgcagta tctgttccgc cgtggataag
781 ctggacaaaa gtccgtggga agaagtaaag aaggagatga tagacgaaaa gggattggat
841 gatcatattg ctgataaagt cggcaagtac gtcttgcaat ccggtggagt ggaactaata
901 gcagagttga gaaaagacaa agagctgatg aaacagactg ttgccgtaca aggtttagac
961 tccatagaac tgttgctgaa gtactgtggc atctacaaaa ttcttgacaa aattaagttt
1021 gatttgagtc tcgcaagagg actcgattac tacacaggtg ttatttacga agctatattg
1081 tgtggagaca atatcggtgt tggtagcgtg gcaggcggcg gccgttatga taatttagta
1141 ggaatgttcg acagcaagaa caaaatggta ccctgtgtcg gcgtgtcatt gggtgtagag
1201 cgaatattca gtgttatgga ggcaaaactg gcgaataaag gcctaaaaac gcgcgctgct
1261 gagatcgaag tgttcgtggc gagcgcgcag aaaaatctgc atgaggagag aatgaagata
1321 ctggcggatc tgtgggaggc aggcgtgaaa gcggaacaat cctacaagaa aaatgccaaa
1381 ctcttggcac agttgcaaca ctgcgaggaa aatggcattc cgttggcgat aatcgtcggc
1441 gaaggcgagc tggcgcaggg tgaagttaca ctgagagtcg tctcgacgcg ggagcagact
1501 cgtgtgccac gtagcaatct cattgaggaa atacgaaggc agctaaaaac gtcgtagcac
1561 cacttcttgt ataagtttct tttgctgtcg gagatttaca tcagtacaag aaactcttta
1621 tattgcattt agtaccattt cgattcgcgc tggggagaga gaaaagttta tttatttttt
1681 tctttatgaa tttatttgta tgtacttcgt acaacatact aaacgaaatg accgtgaaaa
1741 actttttgtc accgatagat gctaattaaa gttgtacaat aaatgaatgc acgaggaagt
1801 gtaacgatgc cctacattta ccaagtgcaa catagacaat ttccaggtgg aatcctttat
1861 atataactaa atttctccgg atgaaatctg gtattttagc agattaattt aactggtaat
1921 aattcatagc ttcaagctac cactcgagaa accaaataca tctttataat ttattctgca
1981 aaagaattta acaataaaat attatataaa tttcgtagaa catgtttcgt tccttccttt
2041 actattgatt tcaagagaaa tatgatcaca cgagtgacta caatataaat aaatgtccaa
2101 gttacaagat cgctgacagt atttaaaata taaaatatta atctgcatat tatttcgatt
2161 atttaacgta atttaggtcc taaaaactta ataataaatt cttgaattaa tcggacttta
2221 atactctaga tttaaaagaa aattttttta cttttcatta tttattaaca aaaaattttc
2281 ttgtctaact atctgtttat aatatctatt ttctaatatc tgttttctaa gtaatttgtt
2341 tcactagttt tgtgaaattg aggatagaca taatatatgc tttatttatt atatcacagt
2401 cttgtctaag tttaaattaa aacttaataa tatgcatatt ttataattta cttacatttc
2461 taataattat cattaacgtt atattaatgt tacttcataa aatgtacatt tgtcttgaaa
2521 aatgctataa atccgactag tttgaaaagt tggatttacg tatattgatg aaacttttca
2581 caaagcttgt cactctgttg ttaaattaca tctttcctta tactgtataa aatttatatt
2641 ttctatctac attcttttaa taaattacct aacattttga aacaagacac gaatttgtta
2701 attactacta gtaaaaagtt ttcaaactaa catatgtagg ataggattat ttcttgcaca
2761 cgtaatagca agctacaaat ccttaattga caagatttcc gatttcataa gttatttttt
2821 gcagtaaata caaaaaatca tttttcctgt atttatgtag tcattttttt aacaaaacta
2881 tcaattatgt ttaaaaaatg acgtttatct gttaatttta aaaaatattt agatattttt
2941 gttaacaaaa cttgacgtca aatttttctg ctttttaaaa ttaaacaaca ttatactctt
3001 tcttaattga taaactctcc gtatagtacg attatgaatt ttccttttta tttgtcaggt
3061 ttctcaactt taatttcctt caagtccgca tcctcttcct ttccagcagc tctcgtcata
3121 gctctgtact gttcaaatgg attgatcgtc ggcttttcta tcgtctcttg caatggtggc
3181 ttgtacgagt ttattgacac gctgggtttg tgctttctcg actctgggga acttgtgctg
3241 cttgttaaag tatctaaatt atcaattaca catatgtgt
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