LOCUS LJ646141 1221 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68961.graph_c1_seq12.
ACCESSION LJ646141
VERSION LJ646141.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1221)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1221
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68961.graph_c1_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 438 a 205 c 218 g 360 t
ORIGIN
1 catatgtaaa gcgcttctaa ttaatcgtgt catctttatc aaacagatcg atatgaattt
61 cttagcaaat tttaatgtga aagaaatttt atatctggaa aaaacgtgaa agaatgtatt
121 caaagacgga agatatatat ttataatcag acataaacct aactatttgc aaacggcaaa
181 cgtagtaatc gagtatttag atatcaattt tataacgtac tctgcgcagg aatgtggcat
241 aagtggcaag aagtacacgt tcgcgcaagc caaggatgcg acaagttata tcggcagaag
301 tttgcggaac atgggtctca aaaagggcga tgtagtagca ctagcggcac ctaattttcc
361 ggatacagtt ttaggtcttc ttgggagctt gtcaggcgga cttgttgtca ctaccgtaaa
421 tccaataaat acgagtggta agtcgcttgt tgttatttca aacattccat tttgagattc
481 atataaaaaa attaatgtgt atgaaatatt actaataaaa taaagcagga aaaattgaaa
541 aaaaaaatcg taattaaact taatgttaca ataagtagac gtgataaaaa ttttcagagg
601 aaatgcagag acaattgttg aaagttaatg caaaagcaat cattacttcg aacgacattg
661 catccagagt gctcgcaagg gtatgtcttc cacgtgaaac tcctttcatt gtgattgacg
721 ataggactgg tcctatgcca gagggttcaa taccttttga tgatctcata acgcgaggca
781 aatcattgtc acctgtaaat ctaaacacta attgtgacga tgtagcggtt ttaccattct
841 caagtggcac tactggatta ccaaaaggtg ttatgctaac acatcgcaac ttggtgtcta
901 atataatgat gtgtaaaact actttcaatc catatcagcc tactacaagc acatatcaag
961 aagtaatacc tgctgcacta ccctttttcc atatttatgg gataaatgtt atagcatttc
1021 ctcgtctcgc tttcggcgcg aaaatagtca ctatcccaaa atttgaaccg gagacgttcg
1081 tcaaagtatt agaaagaaat aaggtgattt attgtttgcc atatataaat aattctcaac
1141 tttgaatacc atatttgagt accataaatt gtaactactt cgtaacaata aaataaaata
1201 aaatatcaaa aaaaaaaaaa a
//