LOCUS LJ646138 3555 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68961.graph_c1_seq9.
ACCESSION LJ646138
VERSION LJ646138.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3555)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3555
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68961.graph_c1_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1280 a 513 c 597 g 1165 t
ORIGIN
1 catatgtaaa gcgcttctaa ttaatcgtgt catctttatc aaacagatcg atatgaattt
61 cttagcaaat tttaatgtga aagaaatttt atatctggaa aaaacgtgaa agaatgtatt
121 caaagacgga agatatatat ttataatcag acataaacct aactatttgc aaacggcaaa
181 cgtagtaatc gagtatttag atatcaattt tataacgtac tctgcgcagg aatgtggcat
241 aagtggcaag aagtacacgt tcgcgcaagc caaggatgcg acaagttata tcggcagaag
301 tttacggaat atgggtctca aaaaaggtga tgtggtagca ctaatggcac ccaattttcc
361 ggagacagtt ttaggtttac ttgggagcat gtccggcgga ctcattgtca ctactataaa
421 tccacagtac acggctgagg aaatgcaagg acatttgttg aaagttaatg caaaagcaat
481 cattacttcg aacgacattg catccagagt gctcgcaagg gtatgtcttc cacgtgaaac
541 tcctttcatt gtgattgacg ataggactgg tcctatgcca gagggttcaa taccttttga
601 tgatctcata acgcgaggca aatcattgtc acctgtaaat ctaaacacta attgtgacga
661 tgtagcggtt ttaccattct caagtggcac tactggatta ccaaaaggtg ttatgctaac
721 acatcgcaac ttggtatcta acatgatgat gactcagact actttaaatc catttcagcc
781 tactacaagc acatatcagg aagtaatact tgccgtatta cctcttttcc atatttatgg
841 gataaattgt acagcatttc cacgtctcgc tttcggtggg aaagtagtca ccataccaaa
901 atttcaacca gagacgttcg tgaaagtatt agaaaaaaac aagataactg tactgttttg
961 cgtaccaccc atggtacttt ttctaacatc ttcgcctctt gtgaagaagc attatttcga
1021 tcatatgcat atgatgttga gtggtgccgc accgctcgcc aaaacggacg ccgatagatt
1081 ctacgagaaa cacaacgttg acccaaaagt tttaaagttt cgtcaaggtt acggaatgac
1141 agaaagttcg ccatgtatat gcgttgaact tggacagaaa tattctagca tcgggaaaaa
1201 tattgctagt tgccaaatac gcttggtgga cataaagaca cagaaggata tcactactcc
1261 aggtcaaact ggtgaaattt gggtaaaagg acctcacatt atgaaaggat atctaaatga
1321 cgaagaagct acgaagaata ctataactga tgatggatgg ctgaaaacgg gcgatgtcgc
1381 atatttcgat gaagattttg atttctatat tacagacaga ttaaaggaac tcatcaaagt
1441 caaaggattt caggtaccgc cggcggaatt ggaagcggta ctgcggacac atccagacgt
1501 ggaggaagca gcagtgatag gtattccgca cgagagatat ggtgaggtac cgaaagcatt
1561 tgtaatggta agcaagggta agaagcctac ggaggacgac attaagaatt tcgtaaaagg
1621 aaaggtctcc gactacaagc aactgaaagg tggagtcaca ttccttgacg atattccgaa
1681 aaatccgagt ggaaaaattc taagatcaaa gttaaagcaa gtctacaaat cttaacacca
1741 tcaatgtaat atcattttaa taaatttatt ttatttaatc gttttttgga ggctctacaa
1801 tattgttatt acctaaagtt atcaaaattc aacaattatt atatttaaat tttttacata
1861 tatctagttt tcattattta acaaaaaaat atagttacaa ttttttaaat tttggacgca
1921 aaaagggttg taaataagaa tataataaaa aatttagttt ataatggctc atgcagcgaa
1981 aatgaatgta ttatcttgca atttcagata agaaatatta atttttactg ttaaacgaca
2041 aagtggattc aattttttca taatcttttg tacaaataac acaaaattta tagtgtgata
2101 aaataaatgt aagaattatg aggtttcata cacaaagaga aaatataacg tacctaatat
2161 tcgtacccct taattcgact ttcgcatgag tcacgtcttc attctggtat cacaataata
2221 ttaattgcat gatattgtac tacttatctt gtaatacaaa tatcgaaaga tgcgcataat
2281 atggacgctc aattacacca gtgttcggta aaagtgtgta tacatatata aaacagaaat
2341 ggacaatttt ttgaataaag aataatcaat aacgaataaa gctttattta tgaataacga
2401 ataattttta ttcgaataaa aatttattta tcattcgtaa ataaaatctt atttattatt
2461 cgttatttac ataatacaaa taaaaaatat aaataaaatt ttgtaaataa aattttattg
2521 gaattagcaa tttaaattat tgtttctcaa gttaagatta aattatttat ttaacttatt
2581 agtaaaacat ttttattttt atatggtata tgtgtacaat aattttttta ttttattctg
2641 ttttacttat cttattgctt attttattta ttatttaata ttttttaact tattatttaa
2701 cttattttat ttattatttt actgtcttta ataactataa ttataaatgt atctttaaat
2761 tacaagtgaa aataaatgtg atttttgtag cgtttctata aatttatttg acttttcaaa
2821 tcagccgtat aaagccgatt aaaatgaagt gagattatag agctgttatc aaagttttat
2881 ttttttttta aattttttat tggacataat agtaaaaata aaaaaaaatt aacatgcaga
2941 tgataataaa agaaaaaaat tgtgctaata atgaataacg cgaataataa ataatgttta
3001 taatataaat aacgagtaac gcaaataacg aataaaattt tatctaaata attatctaaa
3061 taaaaaatta ttcaaaaaat aatgaataat gctcaactcg gattgtagtt attctttcat
3121 ttcttcttaa agaaacacaa atatgtggca ctttatagca tgattcgtta attcaaaata
3181 attttttatt ttacgcagat tccaaagaga aagattttag aataaagatt ttacgaaaat
3241 tttgttgatt gcaactaaat atttggaatt agcatactac taatatctct tttttaattt
3301 tttaatgata gctatgtttt aacttattat gtatattatg ttttaatgtg ctatgtgtaa
3361 ttgtcaaata aatgttcaaa agatgagaaa aaaaatgata aagcaatgac ttacgaatta
3421 agcgacgagt gtacttgggt gagtttgcga gtaccttggc acggagtaag atcgacaagg
3481 atacgtgacg gtaactcttc tggatggatg gtccgacctg atggcgagtt cactacgaaa
3541 taccgagatg cttca
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