LOCUS LJ646135 3715 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68961.graph_c1_seq6.
ACCESSION LJ646135
VERSION LJ646135.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3715)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3715
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68961.graph_c1_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1353 a 524 c 619 g 1219 t
ORIGIN
1 catatgtaaa gcgcttctaa ttaatcgtgt catctttatc aaacagatcg atatgaattt
61 cttagcaaat tttaatgtga aagaaatttt atatctggaa aaaacgtgaa agaatgtatt
121 caaagacgga agatatatat ttataatcag acataaacct aactatttgc aaacggcaaa
181 cgtagtaatc gagtatttag atatcaattt tataacgtac tctgcgcagg aatgtggcat
241 aagtggcaag aagtacacgt tcgcgcaagc caaggatgcg acaagttata tcggcagaag
301 tttgcggaac atgggtctca aaaagggcga tgtagtagca ctagcggcac ctaattttcc
361 ggatacagtt ttaggtcttc ttgggagctt gtcaggcgga cttgttgtca ctaccgtaaa
421 tccaataaat acgagtggta agtcgcttgt tgttatttca aacattccat tttgagattc
481 atataaaaaa attaatgtgt atgaaatatt actaataaaa taaagcagga aaaattgaaa
541 aaaaaaatcg taattaaact taatgttaca ataagtagac gtgataaaaa ttttcagagg
601 aaatgcagag acaattgttg aaagttaatg caaaagcaat cattacttcg aacgacattg
661 catccagagt gctcgcaagg gtatgtcttc cacgtgaaac tcctttcatt gtgattgacg
721 ataggactgg tcctatgcca gagggttcaa taccttttga tgatctcata acgcgaggca
781 aatcattgtc acctttaaat ataaacacta attgtgacga tgtagcgctt ttaccatttt
841 caagtggcac tactggatta ccaaaaggtg ttatgctaac acatcgcaac ttggtatcta
901 acatgatgat gactcagact actttaaatc catttcagcc tactacaagc acatatcagg
961 aagtaatact tgccgtatta cctcttttcc atatttatgg gataaattgt acagcatttc
1021 cacgtctcgc tttcggtggg aaagtagtca ccataccaaa atttcaacca gagacgttcg
1081 tgaaagtatt agaaaaaaac aagataactg tactgttttg cgtaccaccc atggtacttt
1141 ttctaacatc ttcgcctctt gtgaagaagc attatttcga tcatatgcat atgatgttga
1201 gtggtgccgc accgctcgcc aaaacggacg ccgatagatt ctacgagaaa cacaacgttg
1261 acccaaaagt tttaaagttt cgtcaaggtt acggaatgac agaaagttcg ccaactgtgt
1321 gcatagaact tggacagaaa tattctagtg ttgggaaaaa tattgctagt tgccaaatac
1381 gcttggtgga cataaagaca cagaaggata tcactactcc aggtcaaact ggtgaaattt
1441 gggtaaaagg acctcacatt atgaaaggat atctaaatga cgaagaagct acgaagaata
1501 ctataactga tgatggatgg ctgaaaacgg gcgatgtcgc atatttcgat gaagattttg
1561 atttctatat tacagacaga ttaaaggaac tcatcaaagt caaaggattt caggtaccgc
1621 cggcggaatt ggaagcggta ctgcggacac atccagacgt ggaggaagca gcagtgatag
1681 gtattccgca cgagagatat ggtgaggtac cgaaagcatt tgtaatggta agcaagggta
1741 agaagcctac ggaggacgac attaagaatt tcgtaaaagg aaaggtctcc gactacaagc
1801 aactgaaagg tggagtcaca ttccttgacg atattccgaa aaatccgagt ggaaaaattc
1861 taagatcaaa gttaaagcaa gtctacaaat cttaacacca tcaatgtaat atcattttaa
1921 taaatttatt ttatttaatc gttttttgga ggctctacaa tattgttatt acctaaagtt
1981 atcaaaattc aacaattatt atatttaaat tttttacata tatctagttt tcattattta
2041 acaaaaaaat atagttacaa ttttttaaat tttggacgca aaaagggttg taaataagaa
2101 tataataaaa aatttagttt ataatggctc atgcagcgaa aatgaatgta ttatcttgca
2161 atttcagata agaaatatta atttttactg ttaaacgaca aagtggattc aattttttca
2221 taatcttttg tacaaataac acaaaattta tagtgtgata aaataaatgt aagaattatg
2281 aggtttcata cacaaagaga aaatataacg tacctaatat tcgtacccct taattcgact
2341 ttcgcatgag tcacgtcttc attctggtat cacaataata ttaattgcat gatattgtac
2401 tacttatctt gtaatacaaa tatcgaaaga tgcgcataat atggacgctc aattacacca
2461 gtgttcggta aaagtgtgta tacatatata aaacagaaat ggacaatttt ttgaataaag
2521 aataatcaat aacgaataaa gctttattta tgaataacga ataattttta ttcgaataaa
2581 aatttattta tcattcgtaa ataaaatctt atttattatt cgttatttac ataatacaaa
2641 taaaaaatat aaataaaatt ttgtaaataa aattttattg gaattagcaa tttaaattat
2701 tgtttctcaa gttaagatta aattatttat ttaacttatt agtaaaacat ttttattttt
2761 atatggtata tgtgtacaat aattttttta ttttattctg ttttacttat cttattgctt
2821 attttattta ttatttaata ttttttaact tattatttaa cttattttat ttattatttt
2881 actgtcttta ataactataa ttataaatgt atctttaaat tacaagtgaa aataaatgtg
2941 atttttgtag cgtttctata aatttatttg acttttcaaa tcagccgtat aaagccgatt
3001 aaaatgaagt gagattatag agctgttatc aaagttttat ttttttttta aattttttat
3061 tggacataat agtaaaaata aaaaaaaatt aacatgcaga tgataataaa agaaaaaaat
3121 tgtgctaata atgaataacg cgaataataa ataatgttta taatataaat aacgagtaac
3181 gcaaataacg aataaaattt tatctaaata attatctaaa taaaaaatta ttcaaaaaat
3241 aatgaataat gctcaactcg gattgtagtt attctttcat ttcttcttaa agaaacacaa
3301 atatgtggca ctttatagca tgattcgtta attcaaaata attttttatt ttacgcagat
3361 tccaaagaga aagattttag aataaagatt ttacgaaaat tttgttgatt gcaactaaat
3421 atttggaatt agcatactac taatatctct tttttaattt tttaatgata gctatgtttt
3481 aacttattat gtatattatg ttttaatgtg ctatgtgtaa ttgtcaaata aatgttcaaa
3541 agatgagaaa aaaaatgata aagcaatgac ttacgaatta agcgacgagt gtacttgggt
3601 gagtttgcga gtaccttggc acggagtaag atcgacaagg atacgtgacg gtaactcttc
3661 tggatggatg gtccgacctg atggcgagtt cactacgaaa taccgagatg cttca
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