LOCUS LJ646134 3009 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68961.graph_c1_seq5.
ACCESSION LJ646134
VERSION LJ646134.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3009)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3009
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68961.graph_c1_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1073 a 446 c 569 g 921 t
ORIGIN
1 catatgtaaa gcgcttctaa ttaatcgtgt catctttatc aaacagatcg atatgaattt
61 cttagcaaat tttaatgtga aagaaatttt atatctggaa aaaacgtgaa agaatgtatt
121 caaagacgga agatatatat ttataatcag acataaacct aactatttgc aaacggcaaa
181 cgtagtaatc gagtatttag atatcaattt tataacgtac tctgcgcagg aatgtggcat
241 aagtggcaag aagtacacgt tcgcgcaagc caaggatgcg acaagttata tcggcagaag
301 tttgcggaac atgggtctca aaaagggcga tgtagtagca ctagcggcac ctaattttcc
361 ggatacagtt ttaggtcttc ttgggagctt gtcaggcgga cttgttgtca ctaccgtaaa
421 tccaataaat acgagtggta agtcgcttgt tgttatttca aacattccat tttgagattc
481 atataaaaaa attaatgtgt atgaaatatt actaataaaa taaagcagga aaaattgaaa
541 aaaaaaatcg taattaaact taatgttaca ataagtagac gtgataaaaa ttttcagagg
601 aaatgcagag acaattgttg aaagttaatg caaaagcaat cattacttcg aacgacattg
661 catccagagt gctcgcaagg gtatgtcttc cacgtgaaac tcctttcatt gtgattgacg
721 ataggactgg tcctatgcca gagggttcaa taccttttga tgatctcata acgcgaggca
781 aatcattgtc acctttaaat ataaacacta attgtgacga tgtagcgctt ttaccatttt
841 caagtggcac tactggatta ccaaaaggtg ttatgctaac acatcgcaac ttggtatcta
901 acatgatgat gactcagact actttaaatc catttcagcc tactacaagc acatatcagg
961 aagtaatact tgccgtatta cctcttttcc atatttatgg gataaattgt acagcatttc
1021 cacgtctcgc tttcggtggg aaagtagtca ccataccaaa atttcaacca gagacgttcg
1081 tgaaagtatt agaaaaaaac aagataactg tactgttttg cgtaccaccc atggtacttt
1141 ttctaacatc ttcgcctctt gtgaagaagc attatttcga tcatatgcat atgatgttga
1201 gtggtgccgc accgctcgcc aaaacggacg ccgatagatt ctacgagaaa cacaacgttg
1261 acccaaaagt tttaaagttt cgtcaaggtt acggaatgac agaaagttcg ccatgtatat
1321 gcgttgaact tggacagaaa tattctagca tcgggaaaaa tattgctagt tgccaaatac
1381 gcttggtgga cataaagaca cagaaggata tcactactcc aggtcaaact ggtgaaattt
1441 gggtaaaagg acctcacatt atgaaaggat atctaaatga cgaagaagct acgaagaata
1501 ctataactga tgatggatgg ctgaaaacgg gcgatgtcgc atatttcgat gaagattttg
1561 atttctatat tacagacaga ttaaaggaac tcatcaaagt caaaggattt caggtaccgc
1621 cggcggaatt ggaagcggta ctgcggacgc atccagacgt gaaagaagca gcagtgatag
1681 gtattccgca cgagagatat ggtgaggtac cgaaagcatt tgtggtgata agcaagggta
1741 agaagcctac ggaagacggc attaagaact tcgtgaaagg aaaggtctcc ggctacaagc
1801 aactgaaagg tggagtcaca ttcgttgacg atattccaaa gaatgcgagt ggaaaaatta
1861 taagatcaaa gttaaagcaa ggctacaagt cttaacgtta ccaaagtgat gtatttttta
1921 taagagaatt attaaaaaaa ataagatgtt aatgatatta aaaattgtac agcatgttgt
1981 acaaagataa atagaatgca attttcggac gagtaaatat tatgtttacg tgtacagttt
2041 tgttaatgaa acactatttt tgatataaat atgtatatat agattaccta gttcgttaga
2101 aatagaacgt aatatcaaaa gacattgtta taactttaag aatagtataa ttttaattgc
2161 aatataatat taattataaa catatatcaa gtagaatttc tttcaagaag acaatttttt
2221 gctagtattg aagataatta gaaatgtttg aaacaatatt tactgtgtgt gtatggacaa
2281 aagtcctaat acgaagatgt tgaggatata atagtttttt attattagcg atcgaaattt
2341 acgaattgta gaactgacat gtcgtgcgtt caagcatata atatgacaag taataaaagt
2401 gttatggcaa gtaatatcac gtatcggttc ctttcacaac aatagagatt ttcatataaa
2461 tatgtgacga tattttcatt aagaaactat ttctggttct acacggaacc tatttgaaca
2521 ttatatatgc ataattatta taatatcgga acatatcata aagtattcat tagcgaaata
2581 ttacgacatg tgtcacctgt caaaattaat tttataatca cgtttatttg tctcgtacaa
2641 aagatgtcaa gattccaaag tttcgaacac attggcaaat tgtgatatgt aatatgtgtg
2701 cctgaatatg tgcaaattgt aaattaaaaa tttaagtatt aaaaataaca atgagaattg
2761 atatttatta attttttgtt attactgttc attaataatt attcattaat atgtgtttga
2821 gtgtatgtgt gtgcgcgcgt gcgcgcatat gttcgtgtgt acagcacaag acagtgtata
2881 taatgtatac aatagcatac atatgtttta ataatatttt gatataacta ttgtatctta
2941 gtttgtactt aaaatttaca taatgttagt ctgttgaata aaacggaatt ttataaaaaa
3001 aaaaaaaaa
//