LOCUS LJ646132 2849 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68961.graph_c1_seq3.
ACCESSION LJ646132
VERSION LJ646132.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2849)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2849
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68961.graph_c1_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1003 a 432 c 546 g 868 t
ORIGIN
1 catatgtaaa gcgcttctaa ttaatcgtgt catctttatc aaacagatcg atatgaattt
61 cttagcaaat tttaatgtga aagaaatttt atatctggaa aaaacgtgaa agaatgtatt
121 caaagacgga agatatatat ttataatcag acataaacct aactatttgc aaacggcaaa
181 cgtagtaatc gagtatttag atatcaattt tataacgtac tctgcgcagg aatgtggcat
241 aagtggcaag aagtacacgt tcgcgcaagc caaggatgcg acaagttata tcggcagaag
301 tttacggaat atgggtctca aaaaaggtga tgtggtagca ctaatggcac ccaattttcc
361 ggagacagtt ttaggtttac ttgggagcat gtccggcgga ctcattgtca ctactataaa
421 tccacagtac acggctgagg aaatgcaagg acatttgttg aaagttaatg caaaagcaat
481 cattacttcg aacgacattg catccagagt gctcgcaagg gtatgtcttc cacgtgaaac
541 tcctttcatt gtgattgacg ataggactgg tcctatgcca gagggttcaa taccttttga
601 tgatctcata acgcgaggca aatcattgtc acctgtaaat ctaaacacta attgtgacga
661 tgtagcggtt ttaccattct caagtggcac tactggatta ccaaaaggtg ttatgctaac
721 acatcgcaac ttggtgtcta atataatgat gtgtaaaact actttcaatc catatcagcc
781 tactacaagc acatatcagg aagtaatact tgccgtatta cctcttttcc atatttatgg
841 gataaattgt acagcatttc cacgtctcgc tttcggtggg aaagtagtca ccataccaaa
901 atttcaacca gagacgttcg tgaaagtatt agaaaaaaac aagataactg tactgttttg
961 cgtaccaccc atggtacttt ttctaacatc ttcgcctctt gtgaagaagc attatttcga
1021 tcatatgcat atgatgttga gtggtgccgc accgctcgcc aaaacggacg ccgatagatt
1081 ctacgagaaa cacaacgttg acccaaaagt tttaaagttt cgtcaaggtt acggaatgac
1141 agaaagttcg ccatgtatat gcgttgaact tggacagaaa tattctagca tcgggaaaaa
1201 tattgctagt tgccaaatac gcttggtgga cataaagaca cagaaggata tcactactcc
1261 aggtcaaact ggtgaaattt gggtaaaagg acctcacatt atgaaaggat atctaaatga
1321 cgaagaagct acgaagaata ctataactga tgatggatgg ctgaaaacgg gcgatgtcgc
1381 atatttcgat gaagattttg atttctatat tacagacaga ttaaaagaac tcatcaaagt
1441 caaaggattc caggtaccac cggcggaact ggaagctgtg ttaaggacgc atccagacgt
1501 ggaggaagcg gcagtgattg gtattccaca cgagagacat ggtgaggtgc caaaagcatt
1561 cgtggtggtg agcaagggta agaaacctac ggaggacgaa attaaaaact tcgtgaaagg
1621 gaaggtctcc gactacaagc aattaaaagg tggagtcaca ttcgttgacg atattccaaa
1681 gaatgcgagt ggaaaaatta taagatcaaa gttaaagcaa ggctacaagt cttaacgtta
1741 ccaaagtgat gtatttttta taagagaatt attaaaaaaa ataagatgtt aatgatatta
1801 aaaattgtac agcatgttgt acaaagataa atagaatgca attttcggac gagtaaatat
1861 tatgtttacg tgtacagttt tgttaatgaa acactatttt tgatataaat atgtatatat
1921 agattaccta gttcgttaga aatagaacgt aatatcaaaa gacattgtta taactttaag
1981 aatagtataa ttttaattgc aatataatat taattataaa catatatcaa gtagaatttc
2041 tttcaagaag acaatttttt gctagtattg aagataatta gaaatgtttg aaacaatatt
2101 tactgtgtgt gtatggacaa aagtcctaat acgaagatgt tgaggatata atagtttttt
2161 attattagcg atcgaaattt acgaattgta gaactgacat gtcgtgcgtt caagcatata
2221 atatgacaag taataaaagt gttatggcaa gtaatatcac gtatcggttc ctttcacaac
2281 aatagagatt ttcatataaa tatgtgacga tattttcatt aagaaactat ttctggttct
2341 acacggaacc tatttgaaca ttatatatgc ataattatta taatatcgga acatatcata
2401 aagtattcat tagcgaaata ttacgacatg tgtcacctgt caaaattaat tttataatca
2461 cgtttatttg tctcgtacaa aagatgtcaa gattccaaag tttcgaacac attggcaaat
2521 tgtgatatgt aatatgtgtg cctgaatatg tgcaaattgt aaattaaaaa tttaagtatt
2581 aaaaataaca atgagaattg atatttatta attttttgtt attactgttc attaataatt
2641 attcattaat atgtgtttga gtgtatgtgt gtgcgcgcgt gcgcgcatat gttcgtgtgt
2701 acagcacaag acagtgtata taatgtatac aatagcatac atatgtttta ataatatttt
2761 gatataacta ttgtatctta gtttgtactt aaaatttaca taatgttagt ctgttgaata
2821 aaacggaatt ttataaaaaa aaaaaaaaa
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