LOCUS LJ642256 1703 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68283.graph_c1_seq2.
ACCESSION LJ642256
VERSION LJ642256.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1703)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1703
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68283.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 666 a 208 c 209 g 620 t
ORIGIN
1 tttttttttt ttttttgtct ttctgcacat taaatagaat taaaatcaat tttttaaaac
61 tttatactat gatatttagt ttttcatatt atatgaatat tatataaaaa ctaaatatca
121 aagtataaat tttcagaaat gtaatttaaa aatttatttt tgaaaaaaac atttgtaata
181 caaaatatat attgtttatt ttaccttaac acaattttaa tataaaaaaa ttgaagatta
241 aatataaaat ataaaaagaa gattaaatat aaccttgcat ctttttttgc ataaactttc
301 aataatatta aatgcgcata catatacata tataaaacat tgcttatttg ttcatatata
361 catactattc aaagtctaag tccttcaatt taataagttc tctttaaaaa aaaaagaaaa
421 aacagtcata ttttattact gttttgtaat acaaaattaa tgaaaatgct taatattatg
481 tgtcaagaaa tttttttatt tcaaaaaaat tgactttcat aatagtatta ctaagaaatg
541 gagcaaagac aaagtgtaag acaaaatgta aagttaaata aaagtttact gtatttatta
601 cttttaaatt aatgcgtaat tgaattaatt aaaattaaaa aatctaaaaa attcagtgtg
661 cgcttagtaa tactttaaga tttcttactg caaaaattaa attttgagtt atagtagtgt
721 taagataaac attaccattc aaaaattaaa aaattctatt attttttttc tttaatatta
781 aattatttga aatcccaaaa gattctacgg atgtttaaag atcaaatttt gaaattccca
841 actttgaaaa attctcacaa tcgaaactga aagtatattg caatgaaaac cgagaatatt
901 gttacacaaa attttacttt ttattttaag attataaatt ggtagcagtc tgtttatgaa
961 atttataatt atcttgaaca atctcattaa agcttaactt tgaaatgata ttaaacagac
1021 aaatataaaa tataacagaa attcatattt aagtataaaa cttttataga attacttttg
1081 gaattaaata agctttcttc aaatttgcat ttgatatagc acactgatat agcattgttt
1141 aagacaactt gtagttgttt gtaataaaat tttgtaaata gaattgtcaa tttaaaaatt
1201 gaaattttga tttacaaact gatttatgat ttcattgcaa tattccagac atgcccatgt
1261 tcaaaatcga aatatttgac atcttaagaa cgatttaaag atgtttttaa cattatgaca
1321 tgctgaaaaa catttttaag atgtctttaa gtcatcctct gtcacgattt tgaatatgcg
1381 tgctgtctga gattatttca aagatgcgat attgtgagcg tcttaaaaga gttttccaaa
1441 attaaaaatt ttaatctttg atgttcttaa aggatttaat gtaattttaa gatagaacgt
1501 cagaactaca tgaagacact atgtaccaat cacgattacg agattccgtt tcgcgtattt
1561 atctcgcgca gaaaccaacg gaagattgaa accgagagtg cgaccaggaa accgaaaagc
1621 cgtgcgagag taagagtggc cgcctgaccg cgacgaggct cagcgagaac tccccatgtt
1681 actctggcgt tgataccact gca
//