LOCUS LJ640078 1319 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67626.graph_c0_seq12.
ACCESSION LJ640078
VERSION LJ640078.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1319)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1319
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67626.graph_c0_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 410 a 237 c 217 g 455 t
ORIGIN
1 gacactcgtc gaccaatata tcggaataaa gcgagctgtt ctccagttcc attgttcgcg
61 cgacgttaat attatacggc gacacagcga gagtacctag ttcgctcgta gagacgaaac
121 atatacaaac gagagaaaat aacttctccc attgaataac gaacattaat cttgtgaatg
181 cgaacgttaa tcttggattt ttccgcgcgt tctctgcgag ggcaacaaaa agagcatctt
241 attgcctatg ccttcgtgcc gcttgtgcga aaatgttcgc agattattct tgacgtagtt
301 tcgaggagct tctctttttc tcaaaaagga agcggcgaaa ggtttcatta aattaaggga
361 tctctttcaa gatttgtaac acattttcat aagtacttcc gaacaaatat tattttgctt
421 ttaagaagaa tattgaaata catgatattt aatgcgaagg gtctctcctt cgatgttaga
481 tatattttag agatacttta tacagtagaa aatattttgt atttatatta agccggccgt
541 tgttaaaatt cttgtgttga atttttaacg tatctaagga ttaatttaac ataacgtgat
601 tatgttattt tgaatatttt gtgttaaatt gatatttaat atttcttagt gttaatataa
661 cacaatttag gagcgaataa acaaataaca taaaagtaat gtagctttaa aacatcaagt
721 acaagataaa tgaataaaac gtacgtgtca acatattaga aatgttaatt ttactgaaga
781 aatatgtttc catatttaat ttctaaactg gatcgagatg ttacaagttt tttttacata
841 atatttacgt tactttctaa catatttatc ttgtgtcaaa ttaatacaaa aatttgaatg
901 gacatgagat atatgttaat tttaacacaa attttccaac tgtgtggaat agagaacaga
961 aatagctgaa tatattgaat aggggaaatg tataaaacat tctttacgca atgtattcaa
1021 ccgtccctta ttctttactc cccgttccct attcctttta tcgcgcgcag tcccttaggc
1081 gccacattta tgtcaggcga ctaatttttc tatatcggct taattgtttc tccccttcaa
1141 ttgcctggat gcctgcgtaa gctttcgctg tcgcgcctgt ccgcagaaat aaaaataaat
1201 ccgctgacat ccgcgaaacg cattcccgcc cattgacttt tgccattact tctaatattc
1261 tctgacagtg tattctccat tttcccgttc tctcgcatgt ttattccgag tattaaaac
//