LOCUS LJ638686 2001 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67420.graph_c0_seq2.
ACCESSION LJ638686
VERSION LJ638686.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2001)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2001
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67420.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 566 a 396 c 334 g 705 t
ORIGIN
1 gtatcaacgc agagtacatg cataagaacc aatcgagagc gttccacttg gacactgtct
61 gataggacac agccattcat atcggcggtg gctaaatatt ttttactgtt ccatctgtaa
121 gcgaatgtac atttctatgt ccattaactg cgaaagacta tacaacgcgt cgagtaaaac
181 gtcttcattc agagatggat aaggatcata ttgaatctaa attagttgca atacctccct
241 tcagtgagta gaagaatgat gtgatgtaat tcaccattgc gatatgcaat aaaatgttat
301 ttaatacaaa tacaaataat caattatctt tttgtcaagt aaaatgcatt taaaatatat
361 ctagattaag attttacaaa ggaactttta agattaagat attaaacttt tgtgtgtatt
421 aaataatcag acacatgaac acatagttaa tttattcaaa tagctaccta tatatttttt
481 ataatttttg taatgcgttg caataatatt ttatcgctcg cgatacaatc aatttataac
541 cataacatga tagtgttaca ctgttgcatt ttggtataaa tacgatttgt tcaggaaaca
601 attgtgatac tattactcaa catattgtaa aaaatgtaaa gtaaatgtat tgaaatgtat
661 tttaagaaat gtaaatgtat ttttttactt tgtatataga taagcttttt tcgccgtttt
721 aatcacattt catatttaca aatctaaatt gtatctgagc ggagagattt cgatttatta
781 ttatataaat tacacaaaca gttgactaag accatcggca gtcacttatg tgggctgtca
841 tgtgcccgca ctaatatgct tgacgagttg taaacaattc gctacttcaa ttaacgatcg
901 atttctccaa ttaaactata gaaaagtgta ttcacgtttt ccctcgagat attaatctct
961 aaatacctca tctatgtatc gtttgttcga tcgcgaattg cattgaagat tcgctttgca
1021 tgcgatatag tgctcaacat tgatattcca tttaccacgc tcatttctct ttattcagtg
1081 cttgaataaa ttcttctagt ttctcttgga tctgccgaac tcgtttgagt tcctctgcta
1141 atgtgactcg tctgcctgtg agtagtttct gtttaatttc attatcttga ctataatctt
1201 caagaacttc cttgatttct ttatctagcc tccgagcttc tctattcata atctgttgtc
1261 taagtgcatt cgcagtgact ttcagcattt gctgaattcg ccagaaaagt acgacatcgt
1321 tacattccat ttcgttttca tgcccggtgt ggtataaata atatcctttt ctgcaatcat
1381 acgctctcgc taaactttgt tgtaggaaaa atctcctgta cacaggatgc cacgtttccc
1441 gaatgaattc gttatcaacc tctaatccgt tcctttgtaa attcttccta acggttgtga
1501 gctcgtcatg tgttagagtc ggtgcatgtt tcttatcaga gtagagaatt ttatccagct
1561 cgtttttgac tgacgtacgt ttctgctgct cctcggtttg actctgccaa tacatccacc
1621 gttccttgcg atcaggcccc agcatatcgc ggagaatctg ttctgtactc tgcagttttt
1681 ccttaacaga ggtttccaag aaacgcactg cttggtccca ttcacgttta tcattcacgc
1741 ttctatcttc taaaatgtta agttggataa cgcgtagcat ttccgatgcc ttctcttccc
1801 acgaatgacg tcgcattgcc tcatttacta cagcattttt gaggttatca aaaatatcgt
1861 cgtgatccgg gctcagtcga gcctgtgaca taaagttttg aaattcctgt tgcaaacact
1921 cccatccact ttcgacgcta cgcgcaggta attgttgctc agcccaatgt ctgagcttaa
1981 tgtcgaccgt ggtattgaat g
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