LOCUS LJ638685 1995 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67420.graph_c0_seq1.
ACCESSION LJ638685
VERSION LJ638685.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1995)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1995
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67420.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 563 a 395 c 336 g 701 t
ORIGIN
1 gtatcaacgc agagtacatg cataagaacc aatcgagagc gttccacttg gacactgtct
61 gataggacac agccattcat atcggcgttt atgggttgca ggttccatct gtaagcgaat
121 gtacatttct atgtccatta actgcgaaag actatacaac gcgtcgagta aaacgtcttc
181 attcagagat ggataaggat catattgaat ctaaattagt tgcaatacct cccttcagtg
241 agtagaagaa tgatgtgatg taattcacca ttgcgatatg caataaaatg ttatttaata
301 caaatacaaa taatcaatta tctttttgtc aagtaaaatg catttaaaat atatctagat
361 taagatttta caaaggaact tttaagatta agatattaaa cttttgtgtg tattaaataa
421 tcagacacat gaacacatag ttaatttatt caaatagcta cctatatatt ttttataatt
481 tttgtaatgc gttgcaataa tattttatcg ctcgcgatac aatcaattta taaccataac
541 atgatagtgt tacactgttg cattttggta taaatacgat ttgttcagga aacaattgtg
601 atactattac tcaacatatt gtaaaaaatg taaagtaaat gtattgaaat gtattttaag
661 aaatgtaaat gtattttttt actttgtata tagataagct tttttcgccg ttttaatcac
721 atttcatatt tacaaatcta aattgtatct gagcggagag atttcgattt attattatat
781 aaattacaca aacagttgac taagaccatc ggcagtcact tatgtgggct gtcatgtgcc
841 cgcactaata tgcttgacga gttgtaaaca attcgctact tcaattaacg atcgatttct
901 ccaattaaac tatagaaaag tgtattcacg ttttccctcg agatattaat ctctaaatac
961 ctcatctatg tatcgtttgt tcgatcgcga attgcattga agattcgctt tgcatgcgat
1021 atagtgctca acattgatat tccatttacc acgctcattt ctctttattc agtgcttgaa
1081 taaattcttc tagtttctct tggatctgcc gaactcgttt gagttcctct gctaatgtga
1141 ctcgtctgcc tgtgagtagt ttctgtttaa tttcattatc ttgactataa tcttcaagaa
1201 cttccttgat ttctttatct agcctccgag cttctctatt cataatctgt tgtctaagtg
1261 cattcgcagt gactttcagc atttgctgaa ttcgccagaa aagtacgaca tcgttacatt
1321 ccatttcgtt ttcatgcccg gtgtggtata aataatatcc ttttctgcaa tcatacgctc
1381 tcgctaaact ttgttgtagg aaaaatctcc tgtacacagg atgccacgtt tcccgaatga
1441 attcgttatc aacctctaat ccgttccttt gtaaattctt cctaacggtt gtgagctcgt
1501 catgtgttag agtcggtgca tgtttcttat cagagtagag aattttatcc agctcgtttt
1561 tgactgacgt acgtttctgc tgctcctcgg tttgactctg ccaatacatc caccgttcct
1621 tgcgatcagg ccccagcata tcgcggagaa tctgttctgt actctgcagt ttttccttaa
1681 cagaggtttc caagaaacgc actgcttggt cccattcacg tttatcattc acgcttctat
1741 cttctaaaat gttaagttgg ataacgcgta gcatttccga tgccttctct tcccacgaat
1801 gacgtcgcat tgcctcattt actacagcat ttttgaggtt atcaaaaata tcgtcgtgat
1861 ccgggctcag tcgagcctgt gacataaagt tttgaaattc ctgttgcaaa cactcccatc
1921 cactttcgac gctacgcgca ggtaattgtt gctcagccca atgtctgagc ttaatgtcga
1981 ccgtggtatt gaatg
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