LOCUS LJ638682 3610 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67419.graph_c1_seq7.
ACCESSION LJ638682
VERSION LJ638682.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3610)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3610
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67419.graph_c1_seq7"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1227 a 633 c 577 g 1173 t
ORIGIN
1 acaggaaagc agtggtatca accatgagag tacatgggat gatgacttct tatgggaatt
61 tatcaaagtt gtaagttatg tacactgaat tcacaatagt agaattcaga tagaaatctt
121 attttataca catctatgta actttctata ttctttttag tcaaataaga tttatgttct
181 gtgcaataaa aagatacata ctttggaaca aaagtctaca aattgagtat gtttcaaata
241 cgtaattacg atgtagaatt atatgtaaaa gtttgaaaga gtacgaattg agtttatgat
301 aaaagtcaat attcacaagt actcattctg tacatgctgt tatgaattca gcaattatac
361 ttggactttg aataaaatcc ttgccattag ctacgacttg tataccatgc atataaccac
421 atgaatatat acctgcgtat aactgctgga tcgaaaattt attttatata aactaaaatg
481 cgtgtggaca aataaatgtg acataattgt agcttccgaa aaaaagaatg cttactaaaa
541 ttgcttgttg ctgagtcatc aagaaagaaa attatattca aagcaacaaa cgatatattt
601 atttattgga ttctatactg atatggggta atagtataaa atattagaga aaaacaaata
661 catgtattta aggaaataaa acgaccataa cactggaata aaaatcgtca cagcattaac
721 taataaaagt aatatgatat tgctgtgtat taaacaggaa atggaagcat aaacaatatt
781 cagctaataa ctttaacttt gtaataaata tatccttcta gatacacaca ttaagtacat
841 tggaaaaata tctttgattt tttgtattat ctgtcatttt atcataatta tttaagatgc
901 aaagttatat gttgttatat caatttgtga taattaaaac attattcata ttcgttatac
961 aatccaaaaa tttacaaata attttatata caaataattt tctacgcaga aattaaacaa
1021 tgtatattaa tttaatgtaa agttatatta tgcataatat tatactttaa attatatact
1081 gttattctaa aatgtggata ctctttcatg gatatcaatc agctcacgtg tgggaatgca
1141 agattagtac tttgaaaaat taatttaggt attatatttg tataaatcac ttgaagaaaa
1201 tataataaca aataacagtt gcccaatata ttattctaaa tagcagttcc tctttctatc
1261 catctaatag aaacatttaa tttaacaatt gtatgtgaat tgtgtgaagt gtgcaaatat
1321 gcctgtgtca tcatgttcct aattaaaaat attcactgtc tcacaataca acggatcatt
1381 gatattaata taacttcttt taagccatat cacccataat cattttctta aaaaatcttt
1441 ttatcttaat gtattcatag aatttcatgt tatattatat ttacaaataa ctattcattt
1501 attaagggat tgcaaagacg acaaatacat taattttttt gcagacgtaa tcgatgtgaa
1561 aactatatat taaaaagaaa atgataaaat caatgattat aaatgacaat tagacatgtt
1621 gtatataaaa aatattaatg tgaaaacatt ttgataacca acatatatat tgataaatca
1681 caaaaaaact aagatttgtt tattttactt aatatttact taatattacg ttgtacatat
1741 aaatcgcaaa tcctatactt aaaaatgagg tcggagatat gaaatacaat tgtgatgatg
1801 tttatttaaa tatttatatt ttatcagaaa atacttaaca tgcagttttt attacaaagt
1861 ttctcaaata actcaaatga aaaatatata tgcaatattt tattcttgta aaaaaatacc
1921 ttgtttttca tattactaat ataaagctca cgcagcaata tattcacaca aattccattt
1981 tgtgagacat tcggattata ttacaaatct gttcaaaaat gtaatacaag aatagtttca
2041 aatgtataat taatggcaca taaaatgaga agaagcattt tgaaatttac attgagcaaa
2101 tctgcttaca aagtgctgct gcaatattaa tatatctcgt gaccaggaat tgaaaattgc
2161 ctcgaaaagg tttccacttc ctctttcaga gccgcaactt ttgctttaat attctcgtca
2221 gtgcttaata ctttcttgaa gtcgggcagc ttcggtcccg aaatagcact cacttcctta
2281 gaaagctgca gtcctctatg tatgaaatcc acaactttgt caaagtcttc ctcgattaag
2341 ccacgagtgg taagtgcggg tgttcccaat ctaattccgc taggattcaa tgcactttta
2401 tcaccgggaa cagtattctt attgcaagcg atagaaatat cttccaggat cttttctgcc
2461 ttcgaaccgg tgatacccgt cgatcgtaga tctaccaata acatatggac atctgtgcct
2521 tgagtactga tattataacc gcgttcttgc aaaccggcgc acaatctctt cgcattagcc
2581 gctacttgct tctgataagc tataaattct ggtgttttaa cttgtttcat agtggtggct
2641 atagcagcaa tagcatgatt gtgaggcccg ccttgaagac ctggaaagac tgcctgattg
2701 attttactct ctatgtcgta cataatcttc ttgccgtcct tcgcgacgct tcgaacgcct
2761 tttcggtaga aaataacacc agcgcgcgga cctcgtaaag tcttatgcgt agttgtcgaa
2821 acaacatcgc taaattcgaa aggactgggt attattccgg cggcaaccaa tccagcgacg
2881 tgagccatgt cgctgaagag ataagcatta ttctcgtcgg cgatttcgcg gaaacgttta
2941 tagttcagac acctgctata gcaggaaact ccagcgatga tgactttcgg cttgaataat
3001 ctcgcctgtt tctcgagcgc atcgtaatcg atgtaaccat tcacgggatc aactttgtac
3061 ggcatcgatt cgaagaaaat agatgtagcg gaaatcttct tgttcgccgt gaagaaacca
3121 tgagtaagat gaccaccatc gggcaaatct agacccatta tacgtccgtg aggctccaac
3181 aggcccgtat acactgcgaa attcgctgga cttcccgaat aaggttgtac gttgcagccc
3241 cattcttcag gatccaaatt aaaagcttcc aaggcgcgtt tctgcgccag caattcaatc
3301 tcgtcaataa attcgtttcc accgtagtat ctttgaccag gcagaccctc gctgtactta
3361 ttatgcaaac acgagctaag acattgaagt acgctgagag acgtgaagtt ttcactcgcg
3421 atcagctcca atccggattc ctgccgtttc ctctccttct tcatcaactc gaagagctca
3481 gaatcactct cccaaatgtt cttttgaagt atcgatgcca tgttttggtc cggtgtgcaa
3541 cacgttgtcg aaagatgata gcctcgtcta tgcagaaggc cgcgaacgtc tgcctggtca
3601 aagatactac
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