LOCUS LJ638680 2105 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67419.graph_c1_seq5.
ACCESSION LJ638680
VERSION LJ638680.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2105)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2105
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67419.graph_c1_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 569 a 462 c 435 g 639 t
ORIGIN
1 tttttttttt tttttttttt ccatgcataa taaatccatt ttttattaga aaagaattat
61 ataacaataa tgtttcatac atttctattt tataatagaa atgtaccgcg ctatcgaatt
121 tcgaacaagt tggatatacg aaatacaaat ttcgttgtaa aaatatataa tttaaaaaat
181 ttacatttaa tgacataatg aaaacattat ggaacaagat taacgaaaag cgaaatatgt
241 tttatggtgc ttaatatgtt tcgttaccag gcattgaaaa ttgcctcgag aaagtttcca
301 cttcttcctt taaagccgca acctttacct tgataatttc atcagtattc aaaaccctct
361 tgaagtcaac tagctttgga ccggagatag cactcacttc ttttgaaagt ttcagtcctt
421 tatctataaa gtccgcaact ttggcgatgt cttcctcgac taaaccacga gtagtaagtg
481 ctggcgttcc taaacggatt ccactaggat ttaacgcact tttatcacca ggaacagtgt
541 tcttattaca ggcgatagaa atgtcttcca agatcttttc tgcctttgaa ccggttatgc
601 ctgtggatcg tagatctact aacatcatat ggacgtccgt gccaccagta ctgatgttat
661 aaccgtgttc ttgcaaacgg gcgcacagtc tcttcgcatt agccactatt tgcttctgat
721 attcgagaaa ttccgatgtt ttcacctgtt tcatagtggt tgctatagcg gcaatagcgt
781 gattgtgagg tccaccttga agacccggaa aaaccgcttg atttattcta ttctctatgt
841 catacataat cttcttgccg tcctttgtga cgcttcgaac gccttttcgg aagaaaataa
901 caccagcgcg gggacctcgt aaagttttat gtgtagttgt tgaaacaaca tcgctaaatt
961 cgaaaggact gggtattaat ccggcggcga ccaatccgga aacgtgagcc atgtcgctga
1021 agagataagc attattctcg tcggcgattt cgcggaaacg tttatagttc agacacctgc
1081 tatagcagga aactccagcg atgatgactt tcggcttgaa taatctcgcc tgtttctcga
1141 gcgcatcgta atcgatgtaa ccattcacgg gatcaacttt gtacggcatc gattcgaaga
1201 aaatagatgt agcggaaatc ttcttgttcg ccgtgaagaa accatgagta agatgaccac
1261 catcgggcaa atctagaccc attatacgtc cgtgaggctc cagtaagccc gtgtacacag
1321 cgaaattccc cggacttccc gagtaaggtt gtacattgca gccccattgt tcgggatcta
1381 aattgaaggc ttccaaggag cgtttttgcg ccagtaattc gacttcgtcg atgaattcgt
1441 ttccaccgta gtacctttgt ccaggatatc cctcgctgta tttgttgtgc aggcacgaac
1501 ttaggcactg taggacactg agagatgtaa agttttcact tgcaatcaat tccagcccgg
1561 attcctgtcg tttcttttcg ttcttcagca attcgaaaag ctcaggatct gtctcccaaa
1621 tgttattatg gagtattcct gccatttttc gttctggtac gcgacacgtg gttgaaagat
1681 gtatacctct gcgacttgga aggccacaga cgtttgggag ctgtccttga ccggcgaaat
1741 tctttataag gtggcttcgg gcccgtaaca ggttctcgac caattggaaa ccacggcgat
1801 tcaaattcaa ccaattcccg gccatcatcg tgcacgtact gacggctgat cagctgtgac
1861 cgaaagcgtg cgtgcgtgtg tttgctacac gtgatgtaac tacgtttcgc acgtgatttt
1921 gcgtcttctt agcacgtttt tgcctcgtcg atcagatgac tcgatttacg acgttgcgat
1981 ttctcgattt tgcaaaataa gcatttactt gtgacgcgat atgtaacgat atatcgatgt
2041 aactgcggag agaacacaat gacgagcacg tcgcaaccag ccgaagaaac tcccgagtag
2101 aaaaa
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