LOCUS LJ638679 3969 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67419.graph_c1_seq4.
ACCESSION LJ638679
VERSION LJ638679.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3969)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3969
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67419.graph_c1_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1297 a 693 c 690 g 1289 t
ORIGIN
1 acaggaaagc agtggtatca accatgagag tacatgggat gatgacttct tatgggaatt
61 tatcaaagtt gtaagttatg tacactgaat tcacaatagt agaattcaga tagaaatctt
121 attttataca catctatgta actttctata ttctttttag tcaaataaga tttatgttct
181 gtgcaataaa aagatacata ctttggaaca aaagtctaca aattgagtat gtttcaaata
241 cgtaattacg atgtagaatt atatgtaaaa gtttgaaaga gtacgaattg agtttatgat
301 aaaagtcaat attcacaagt actcattctg tacatgctgt tatgaattca gcaattatac
361 ttggactttg aataaaatcc ttgccattag ctacgacttg tataccatgc atataaccac
421 atgaatatat acctgcgtat aactgctgga tcgaaaattt attttatata aactaaaatg
481 cgtgtggaca aataaatgtg acataattgt agcttccgaa aaaaagaatg cttactaaaa
541 ttgcttgttg ctgagtcatc aagaaagaaa attatattca aagcaacaaa cgatatattt
601 atttattgga ttctatactg atatggggta atagtataaa atattagaga aaaacaaata
661 catgtattta aggaaataaa acgaccataa cactggaata aaaatcgtca cagcattaac
721 taataaaagt aatatgatat tgctgtgtta aattgaaaac ggaagcatgg acaacattca
781 actaataaat ttagctttgt aataaatata tctctttaga aatatatgta ggtatattga
841 gtattcttca ttgtatttta ttgtctatta cgttatcaga attatttgaa gcaaaactat
901 tatattaata tgtgataatg ataaatcgtt ataattgata ttcgtgttat agaataattg
961 aagaattcta ttctttttaa ttaacttttt gtaaaaatta aacaatgtat attaattcga
1021 aaatcagtaa tataaattgt atatttaaca ttatacattg aaacatgtac tgttttaaaa
1081 gggaatactc tatatatgaa tatcacatca tcagatcatg tatgagatta gttttttttt
1141 tgaagaatta atttaggtat tatatttgta taaatcactt gaagaaaata taataacaaa
1201 taacagttgc ccaatatatt attctaaata gcagttcctc tttctatcca tctaatagaa
1261 acatttaatt taacaattgt atgtgaattg tgtgaagtgt gcaaatatgc ctgtgtcatc
1321 atgttcctaa ttaaaaatat tcactgtctc acaatacaac ggatcattga tattaatata
1381 acttctttta agccatatca cccataatca ttttcttaaa aaatcttttt atcttaatgt
1441 attcatagaa tttcatgtta tattatattt acaaataact attcatttat taagggattg
1501 caaagacgac aaatacatta atttttttgc agacgtaatc gatgtgaaaa ctatatatta
1561 aaaagaaaat gataaaatca atgattataa atgacaatta gacatgttgt atataaaaaa
1621 tattaatgtg aaaacatttt gataaccaac atatatattg ataaatcaca aaaaaactaa
1681 gatttgttta ttttacttaa tatttactta atattacgtt gtacatataa atcgcaaatc
1741 ctatacttaa aaatgaggtc ggagatatga aatacaattg tgatgatgtt tatttaaata
1801 tttatatttt atcagaaaat acttaacatg cagtttttat tacaaagttt ctcaaataac
1861 tcaaatgaaa aatatatatg caatatttta ttcttgtaaa aaaatacctt gtttttcata
1921 ttactaatat aaagctcacg cagcaatata ttcacacaaa ttccattttg tgagacattc
1981 ggattatatt acaaatctgt tcaaaaatgt aatacaagaa tagtttcaaa tgtataatta
2041 atggcacata aaatgagaag aagcattttg aaatttacat tgagcaaatc tgcttacaaa
2101 gtgctgctgc aatattaata tatctcgtga ccaggaattg aaaattgcct cgaaaaggtt
2161 tccacttcct ctttcagagc cgcaactttt gctttaatat tctcgtcagt gcttaatact
2221 ttcttgaagt cgggcagctt cggtcccgaa atagcactca cttccttaga aagctgcagt
2281 cctctatgta tgaaatccac aactttgtca aagtcttcct cgattaagcc acgagtggta
2341 agtgcgggtg ttcccaatct aattccgcta ggattcaatg cacttttatc accgggaaca
2401 gtattcttat tgcaagcgat agaaatatct tccaggatct tttctgcctt cgaaccggtg
2461 atacccgtcg atcgtagatc taccaataac atatggacat ctgtgccttg agtactgata
2521 ttataaccgc gttcttgcaa accggcgcac aatctcttcg cattagccgc tacttgcttc
2581 tgataagcta taaattctgg tgttttaact tgtttcatag tggtggctat agcagcaata
2641 gcatgattgt gaggcccgcc ttgaagacct ggaaagactg cctgattgat tttactctct
2701 atgtcgtaca taatcttctt gccgtccttc gcgacgcttc gaacgccttt tcggtagaaa
2761 ataacaccag cgcgcggacc tcgtaaagtc ttatgcgtag ttgtcgaaac aacatcgcta
2821 aattcgaaag gactgggtat tattccggcg gcaaccaatc cagcgacgtg agccatgtcg
2881 ctgaagagat aggcattgtt ttcgtcggcg atttcgcgaa aacgtttgta gttgagacat
2941 ctactataac aggatactcc agcgatgatg attttcggct tgaataatct tgcctgcttc
3001 gcgagttcat cgtagtcgat caagccactg acaggatcaa ctttatacgg catcgattcg
3061 aaaaagatgg atgtagcaga gatctttttg gtcgccgtga agaaaccgtg agtgagatgg
3121 ccaccgtcgg gcaagtccag acccattata cgtccgtgag gctccagtaa gcccgtgtac
3181 acagcgaaat tccccggact tcccgagtaa ggttgtacat tgcagcccca ttgttcggga
3241 tctaaattga aggcttccaa ggagcgtttt tgcgccagta attcgacttc gtcgatgaat
3301 tcgtttccac cgtagtacct ttgtccagga tatccctcgc tgtatttgtt gtgcaggcac
3361 gaacttaggc actgtaggac actgagagat gtaaagtttt cacttgcaat caattccagc
3421 ccggattcct gtcgtttctt ttcgttcttc agcaattcga aaagctcagg atctgtctcc
3481 caaatgttat tatggagtat tcctgccatt tttcgttctg gtacgcgaca cgtggttgaa
3541 agatgtatac ctctgcgact tggaaggcca cagacgtttg ggagctgtcc ttgaccggcg
3601 aaattcttta taaggtggct tcgggcccgt aacaggttct cgaccaattg gaaaccacgg
3661 cgattcaaat tcaaccaatt cccggccatc atcgtgcacg tactgacggc tgatcagctg
3721 tgaccgaaag cgtgcgtgcg tgtgtttgct acacgtgatg taactacgtt tcgcacgtga
3781 ttttgcgtct tcttagcacg tttttgcctc gtcgatcaga tgactcgatt tacgacgttg
3841 cgatttctcg attttgcaaa ataagcattt acttgtgacg cgatatgtaa cgatatatcg
3901 atgtaactgc ggagagaaca caatgacgag cacgtcgcaa ccagccgaag aaactcccga
3961 gtagaaaaa
//