LOCUS LJ638677 5129 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67419.graph_c1_seq2.
ACCESSION LJ638677
VERSION LJ638677.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 5129)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5129
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67419.graph_c1_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1649 a 938 c 920 g 1622 t
ORIGIN
1 ggacacggcc tcgaggttcc caaatagtgt aaacatggcc tcgcggttca gtcacggtgt
61 ccagcgagtt ctagcgaaat tagaggcttc gataagctcg gagaactatt atgaggctca
121 tcagatgtac cgaactttgt atttcagata cctcggtcag agaaaatact cggaactcct
181 ggaattgctt tacaatggct cgatgcttct gttacagcac gaacagcacg caagtggagc
241 cgacttagga attctatttg tcaatgtttt aacacaatct ggaacggtac ctgctcaagg
301 cttctttgag aagatcacaa gcctgttcag tttaatgagc cccacatctc ccgaaaggga
361 gatatttgtt caatctgcac ttaaatggag tgtaaagggt acagattaca aaactggtca
421 tcccgatttg caccaaaaga tagctcaggt cttttggaga gagaagaatt acataatggc
481 aaggcaacac tttatacata gtagagatgg ttctggatgt gctgcaatgt tggttgaact
541 tcacgagcag cgtggataca tgaacgaaat agatcttttc atagctcaag cagttttaca
601 atatctttgt ttacaaaata aggcgacggc gcaagaggcc tttaattctt atacctcaag
661 acatccaaaa ataaacagtg gcccgccata tcttcttcct ttattaaact tcttgttttt
721 cttactcaaa accattgaca gtggtaaact agctgtgttc acagttctct gtgaacagta
781 ccagatatct ttaaacagag atccatgtta ccgacagtac ttagataaaa taggtcaact
841 tttttttaat attcctcctc cgcgcccgcg caatcaagga ttattcggct cgttattgca
901 atccttcttt aatggcctgg aggatgatga ttcggatgac gagcaacgaa atacagcctc
961 aacatcgcac gccgcgcaag agcttgattg attaaaggtg aggcaacact gtgcagtgtg
1021 atgctgaata ccgaactttt atatattatt cttcgaccca aatattttca ctaactgcac
1081 ctgtgttaat cgacaatgaa atttcaagtt gtgaacgtta cgttcacaaa agaaagctga
1141 cagaattgct gttatttgaa gtaattctaa atgatgtaga accatgagag tacatgggat
1201 gatgacttct tatgggaatt tatcaaagtt gtaagttatg tacactgaat tcacaatagt
1261 agaattcaga tagaaatctt attttataca catctatgta actttctata ttctttttag
1321 tcaaataaga tttatgttct gtgcaataaa aagatacata ctttggaaca aaagtctaca
1381 aattgagtat gtttcaaata cgtaattacg atgtagaatt atatgtaaaa gtttgaaaga
1441 gtacgaattg agtttatgat aaaagtcaat attcacaagt actcattctg tacatgctgt
1501 tatgaattca gcaattatac ttggactttg aataaaatcc ttgccattag ctacgacttg
1561 tataccatgc atataaccac atgaatatat acctgcgtat aactgctgga tcgaaaattt
1621 attttatata aactaaaatg cgtgtggaca aataaatgtg acataattgt agcttccgaa
1681 aaaaagaatg cttactaaaa ttgcttgttg ctgagtcatc aagaaagaaa attatattca
1741 aagcaacaaa cgatatattt atttattgga ttctatactg atatggggta atagtataaa
1801 atattagaga aaaacaaata catgtattta aggaaataaa acgaccataa cactggaata
1861 aaaatcgtca cagcattaac taataaaagt aatatgatat tgctgtgtta aattgaaaac
1921 ggaagcatgg acaacattca actaataaat ttagctttgt aataaatata tctctttaga
1981 aatatatgta ggtatattga gtattcttca ttgtatttta ttgtctatta cgttatcaga
2041 attatttgaa gcaaaactat tatattaata tgtgataatg ataaatcgtt ataattgata
2101 ttcgtgttat agaataattg aagaattcta ttctttttaa ttaacttttt gtaaaaatta
2161 aacaatgtat attaattcga aaatcagtaa tataaattgt atatttaaca ttatacattg
2221 aaacatgtac tgttttaaaa gggaatactc tatatatgaa tatcacatca tcagatcatg
2281 tatgagatta gttttttttt tgaagaatta atttaggtat tatatttgta taaatcactt
2341 gaagaaaata taataacaaa taacagttgc ccaatatatt attctaaata gcagttcctc
2401 tttctatcca tctaatagaa acatttaatt taacaattgt atgtgaattg tgtgaagtgt
2461 gcaaatatgc ctgtgtcatc atgttcctaa ttaaaaatat tcactgtctc acaatacaac
2521 ggatcattga tattaatata acttctttta agccatatca cccataatca ttttcttaaa
2581 aaatcttttt atcttaatgt attcatagaa tttcatgtta tattatattt acaaataact
2641 attcatttat taagggattg caaagacgac aaatacatta atttttttgc agacgtaatc
2701 gatgtgaaaa ctatatatta aaaagaaaat gataaaatca atgattataa atgacaatta
2761 gacatgttgt atataaaaaa tattaatgtg aaaacatttt gataaccaac atatatattg
2821 ataaatcaca aaaaaactaa gatttgttta ttttacttaa tatttactta atattacgtt
2881 gtacatataa atcgcaaatc ctatacttaa aaatgaggtc ggagatatga aatacaattg
2941 tgatgatgtt tatttaaata tttatatttt atcagaaaat acttaacatg cagtttttat
3001 tacaaagttt ctcaaataac tcaaatgaaa aatatatatg caatatttta ttcttgtaaa
3061 aaaatacctt gtttttcata ttactaatat aaagctcacg cagcaatata ttcacacaaa
3121 ttccattttg tgagacattc ggattatatt acaaatctgt tcaaaaatgt aatacaagaa
3181 tagtttcaaa tgtataatta atggcacata aaatgagaag aagcattttg aaatttacat
3241 tgagcaaatc tgcttacaaa gtgctgctgc aatattaata tatctcgtga ccaggaattg
3301 aaaattgcct cgaaaaggtt tccacttcct ctttcagagc cgcaactttt gctttaatat
3361 tctcgtcagt gcttaatact ttcttgaagt cgggcagctt cggtcccgaa atagcactca
3421 cttccttaga aagctgcagt cctctatgta tgaaatccac aactttgtca aagtcttcct
3481 cgattaagcc acgagtggta agtgcgggtg ttcccaatct aattccgcta ggattcaatg
3541 cacttttatc accgggaaca gtattcttat tgcaagcgat agaaatatct tccaggatct
3601 tttctgcctt cgaaccggtg atacccgtcg atcgtagatc taccaataac atatggacat
3661 ctgtgccttg agtactgata ttataaccgc gttcttgcaa accggcgcac aatctcttcg
3721 cattagccgc tacttgcttc tgataagcta taaattctgg tgttttaact tgtttcatag
3781 tggtggctat agcagcaata gcatgattgt gaggcccgcc ttgaagacct ggaaagactg
3841 cctgattgat tttactctct atgtcgtaca taatcttctt gccgtccttc gcgacgcttc
3901 gaacgccttt tcggtagaaa ataacaccag cgcgcggacc tcgtaaagtc ttatgcgtag
3961 ttgtcgaaac aacatcgcta aattcgaaag gactgggtat tattccggcg gcaaccaatc
4021 cagcgacgtg agccatgtcg ctgaagagat aagcattatt ctcgtcggcg atttcgcgga
4081 aacgtttata gttcagacac ctgctatagc aggaaactcc agcgatgatg actttcggct
4141 tgaataatct cgcctgtttc tcgagcgcat cgtaatcgat gtaaccattc acgggatcaa
4201 ctttgtacgg catcgattcg aagaaaatag atgtagcgga aatcttcttg ttcgccgtga
4261 agaaaccatg agtaagatga ccaccatcgg gcaaatctag acccattata cgtccgtgag
4321 gctccagtaa gcccgtgtac acagcgaaat tccccggact tcccgagtaa ggttgtacat
4381 tgcagcccca ttgttcggga tctaaattga aggcttccaa ggagcgtttt tgcgccagta
4441 attcgacttc gtcgatgaat tcgtttccac cgtagtacct ttgtccagga tatccctcgc
4501 tgtatttgtt gtgcaggcac gaacttaggc actgtaggac actgagagat gtaaagtttt
4561 cacttgcaat caattccagc ccggattcct gtcgtttctt ttcgttcttc agcaattcga
4621 aaagctcagg atctgtctcc caaatgttat tatggagtat tcctgccatt tttcgttctg
4681 gtacgcgaca cgtggttgaa agatgtatac ctctgcgact tggaaggcca cagacgtttg
4741 ggagctgtcc ttgaccggcg aaattcttta taaggtggct tcgggcccgt aacaggttct
4801 cgaccaattg gaaaccacgg cgattcaaat tcaaccaatt cccggccatc atcgtgcacg
4861 tactgacggc tgatcagctg tgaccgaaag cgtgcgtgcg tgtgtttgct acacgtgatg
4921 taactacgtt tcgcacgtga ttttgcgtct tcttagcacg tttttgcctc gtcgatcaga
4981 tgactcgatt tacgacgttg cgatttctcg attttgcaaa ataagcattt acttgtgacg
5041 cgatatgtaa cgatatatcg atgtaactgc ggagagaaca caatgacgag cacgtcgcaa
5101 ccagccgaag aaactcccga gtagaaaaa
//