LOCUS LJ638676 1734 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67419.graph_c1_seq1.
ACCESSION LJ638676
VERSION LJ638676.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1734
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67419.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 479 a 383 c 343 g 529 t
ORIGIN
1 tttttttttt tttttttttt ccatgcataa taaatccatt ttttattaga aaagaattat
61 ataacaataa tgtttcatac atttctattt tataatagaa atgtaccgcg ctatcgaatt
121 tcgaacaagt tggatatacg aaatacaaat ttcgttgtaa aaatatataa tttaaaaaat
181 ttacatttaa tgacataatg aaaacattat ggaacaagat taacgaaaag cgaaatatgt
241 tttatggtgc ttaatatgtt tcgttaccag gcattgaaaa ttgcctcgag aaagtttcca
301 cttcttcctt taaagccgca acctttacct tgataatttc atcagtattc aaaaccctct
361 tgaagtcaac tagctttgga ccggagatag cactcacttc ttttgaaagt ttcagtcctt
421 tatctataaa gtccgcaact ttggcgatgt cttcctcgac taaaccacga gtagtaagtg
481 ctggcgttcc taaacggatt ccactaggat ttaacgcact tttatcacca ggaacagtgt
541 tcttattaca ggcgatagaa atgtcttcca agatcttttc tgcctttgaa ccggttatgc
601 ctgtggatcg tagatctact aacatcatat ggacgtccgt gccaccagta ctgatgttat
661 aaccgtgttc ttgcaaacgg gcgcacagtc tcttcgcatt agccactatt tgcttctgat
721 attcgagaaa ttccgatgtt ttcacctgtt tcatagtggt tgctatagcg gcaatagcgt
781 gattgtgagg tccaccttga agacccggaa aaaccgcttg atttattcta ttctctatgt
841 catacataat cttcttgccg tcctttgtga cgcttcgaac gccttttcgg aagaaaataa
901 caccagcgcg gggacctcgt aaagttttat gtgtagttgt tgaaacaaca tcgctaaatt
961 cgaaaggact gggtattaat ccggcggcga ccaatccgga aacgtgagcc atgtcgctga
1021 agagataggc attgttttcg tcggcgattt cgcgaaaacg tttgtagttg agacatctac
1081 tataacagga tactccagcg atgatgattt tcggcttgaa taatcttgcc tgcttcgcga
1141 gttcatcgta gtcgatcaag ccactgacag gatcaacttt atacggcatc gattcgaaaa
1201 agatggatgt agcagagatc tttttggtcg ccgtgaagaa accgtgagtg agatggccac
1261 cgtcgggcaa gtccagaccc attatacgtc cgtgaggctc caacaggccc gtatacactg
1321 cgaaattcgc tggacttccc gaataaggtt gtacgttgca gccccattct tcaggatcca
1381 aattaaaagc ttccaaggcg cgtttctgcg ccagcaattc aatctcgtca ataaattcgt
1441 ttccaccgta gtatctttga ccaggcagac cctcgctgta cttattatgc aaacacgagc
1501 taagacattg aagtacgctg agagacgtga agttttcact cgcgatcagc tccaatccgg
1561 attcctgccg tttcctctcc ttcttcatca actcgaagag ctcagaatca ctctcccaaa
1621 tgttcttttg aagtatcgat gccatgtttt ggtccggtgt gcaacacgtt gtcgaaagat
1681 gatagcctcg tctatgcaga aggccgcgaa cgtctgcctg gtcaaagata ctac
//