LOCUS LJ636147 849 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67902.graph_c0_seq1.
ACCESSION LJ636147
VERSION LJ636147.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 849)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..849
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67902.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 207 a 160 c 254 g 228 t
ORIGIN
1 atattattaa tagagaaata gtaatgttgc gtccgcggat tcgcgagggt tgcgatcccg
61 ggacgtagat ctttttcgtt ggttagtttt ggtgttaagg cagctgtcac cagtcgcggc
121 tccgaatcgt gtgataacac ggccggatac gcgacaaatt ccttgtatgg gaagtaggag
181 gtattgtagg aagatatatt attaggtgat ttatgagtag gtttaggaaa tgtagtagcg
241 ttttattaac gctactggag tagtagcgtg cgtgctcgag cttggcgtgg gattaaatga
301 atgacagagc gagtaatggt tgaatataaa tgtgtatgta ttttcgtaat tatggaatag
361 tagatggtta catatggggg ctgcgggtaa aacgtcatct tgcgaaagaa gcgctttctg
421 ccgccggcgt acgcgcggtg tgccctgcgt ttgcccatac gtgcttcgag cgagacatga
481 tagatttaat atgggtgaag gattgccacg ttaatgcgta tataaacagg taacttaccg
541 atcttaacgc gagagagaga gagagagagc tcggtataga agatctggag gtctgaatgt
601 tggtggtcgc cgatggcagc gaatctcact cgaccaacaa gactgatctg aatttcgagc
661 tccgatttcg ctccttatat aggcaaggat atgggcaaga ggtgtcgcgg gacgattcct
721 caggttcgcg gaaaattcgg agcgatagtt tttcgtaacg tgtggccctt agaagcccgc
781 cccgttccgc gaccgcgcgg cttgcgccta tatcgcgcga gcgcttgtag acttctccgg
841 ggaccgcga
//