LOCUS LJ636022 1079 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67600.graph_c1_seq37.
ACCESSION LJ636022
VERSION LJ636022.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1079)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1079
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67600.graph_c1_seq37"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 334 a 174 c 168 g 403 t
ORIGIN
1 tatatagcag atttgcttaa atttttatat ttacacgaag attctttcaa gtaaaaaata
61 aaatactttc tttcctttaa tgagacgaca ctatatttta gagcttctta aatttttata
121 tttacgcgaa gattctttta ccatcaatag catccacgca gtttgggaaa ttctatttac
181 gaatttccca attgaaatta ttttcacttt ctccccaatc ttttgatttt ggtactggta
241 gaactaaagg ggctaattgt gtccacaatg cttgacaagt ttccgaaatt atttgagaaa
301 ctgtacttgt cccaacacca aatttatatg acatagacac ttgactatct cctgatgcta
361 agtaccttaa tgtcaacaat agacgttctt taggtgagat tggtgtttgt atcacatctt
421 gtctagtaat tactggagca accagtatta acagatcttt gaattgttct gtggtcatgc
481 aacagtaatt tctaaacatt gttggatcat ttaaaatgat agggtacact ttataaaaag
541 caccaaaatc ttgtctattg tgacacaatt ctaatattca aaagcgcttt ggtttgtatg
601 tcttttttat catacatgat aacgcagcta tagtcaataa tttacgtcgt tatgagatat
661 acagattgta catgtaataa tctcgtttat atttaagtac tgctacttgc acttgctatt
721 gataaaaaaa ctttggatcc ataattgttt ctgtaggtga tctctttctt cggtaggtat
781 ataattttta ttacaagtct atacaattag ctcaaattta ttgattagtg cgagcatatc
841 agtctatatt aagaataaca attctagcca catgcaataa tatttttgca aacttttatt
901 tgtgcctcat gggaactgtt cgactgcgct gtctgaaaag ttgaacattg tcaaagtttg
961 ggcaccgcta ttgtcattag aatgtcacta gacagttatt atggctgctg aagatcaatt
1021 ttttttaatt ttataaaaaa cgtaaaatca aatagggctg tgttccgttt ttactggca
//