LOCUS LJ636013 1225 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67600.graph_c1_seq28.
ACCESSION LJ636013
VERSION LJ636013.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1225)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1225
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67600.graph_c1_seq28"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 391 a 198 c 185 g 451 t
ORIGIN
1 tatatagcag atttgcttaa atttttatat ttacacgaag attctttcaa gtaaaaaata
61 aaatactttc tttcctttaa tgagacgaca ctatatttta gagcttctta aatttttata
121 tttacgcgaa gattctttta ccatcaatag catccacgca gtttgggaaa ttctatttac
181 gaatttccca attgaaatta ttttcacttt ctccccaatc ttttgatttt ggtactggta
241 gaactaaagg ggctaattgt gtccacaatg cttgacaagt ttccgaaatt atttgagaaa
301 ctgtacttgt cccaacacca aatttatatg acatagacac ttgactatct cctgatgcta
361 agtaccttaa tgtcaacaat agacgttctt taggtgagat tggtgtttgt atcacatctt
421 gtctagtaat tactggagca accagtatta acagatcttt gaattgttct gtggtcatgc
481 aacagtaatt tctaaacatt gttggatcat ttaaaatgat agggtacact ttataaaaag
541 caccaaaatc ttgtctattg tgacacaatt ctaatattca aaagcgcttt ggtttgtatg
601 tcttttttat catacatgat aacgcagcta tagtcaataa tttacgtcgt tatgagatat
661 acagattgta catgtaataa tctcgtttat atttaagtac tgctacttgc acttgctatt
721 gataaaaaaa ctttggatcc ataactagac ataaagtaat aacatattat tagtcgttct
781 tcaaagggct tttcaacagc gatgaacgca atacgtataa ttagaattaa ttaaaaccaa
841 ctaacttact tgtttctgta ggtgatctct ttcttcggta ggtatataat ttttattaca
901 agtctataca attagctcaa atttattgat tagtgcgagc atatcagtct atattaagaa
961 taacaattct agccacatgc aataatattt ttgcaaactt ttatttgtgc ctcatgggaa
1021 ctgttcgact gcctttcaat gtatattgta caatcgaaga tttttataca tacgctgtct
1081 gaaaagttga acattgtcaa agtttgggca ccgctattgt cattagaatg tcactagaca
1141 gttattatgg ctgctgaaga tcaatttttt ttaattttat aaaaaacgta aaatcaaata
1201 gggctgtgtt ccgtttttac tggca
//