LOCUS LJ636000 812 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67600.graph_c1_seq15.
ACCESSION LJ636000
VERSION LJ636000.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 812)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..812
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67600.graph_c1_seq15"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 279 a 114 c 131 g 288 t
ORIGIN
1 ggattcctga tatgttatca agtttattca tcttattagt tttcaattat tataaaaaaa
61 ctaataaata agagaatcta gttgagaatt agttacatta catctaaaat aaaattaaaa
121 ttttgcattc aacaataaaa atacggtata gcaaccgtgt tatgtctaca ttgttaaaca
181 tgaattttaa taagatataa ctgatactca gtgatgcttg agaagataaa actctagtta
241 acgtaacata acatccactc agaatcctag tcgtgaaata tgtttgatgt taaacctaat
301 tattatttag tattgattaa aaagtattga ttgagtgtca tttcagtgta tgaaaataca
361 gaggattgtg caactgtgaa tgatagtgag gtcccagaag aaagcgagtc tagttcaacc
421 atcagcaatg aacctcttgt ttctgtaggt gatctctttc ttcggtaggt atataatttt
481 tattacaagt ctatacaatt agctcaaatt tattgattag tgcgagcata tcagtctata
541 ttaagaataa caattctagc cacatgcaat aatatttttg caaactttta tttgtgcctc
601 atgggaactg ttcgactgcc tttcaatgta tattgtacaa tcgaagattt ttatacatac
661 gctgtctgaa aagttgaaca ttgtcaaagt ttgggcaccg ctattgtcat tagaatgtca
721 ctagacagtt attatggctg ctgaagatca atttttttta attttataaa aaacgtaaaa
781 tcaaataggg ctgtgttccg tttttactgg ca
//