LOCUS LJ634930 4605 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67520.graph_c0_seq4.
ACCESSION LJ634930
VERSION LJ634930.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 4605)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..4605
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67520.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1503 a 859 c 880 g 1363 t
ORIGIN
1 gcgcgacgcg cgacgcgtcg cgtacaccgg catcgttaat tcgtttttcc gtttcgccaa
61 tttcctcttt taagttcttc cgccgccgtt tctcgcgcgc ggagaaacgc gtaagaaggg
121 taaatcttag cgaggaatat tttgatcgta gcctctaaag taaatgcgtc taatgcggat
181 tgtgacgtga ggaaaaaaat aaaaaaataa aaaataaaag aaaaagagaa aatcgccgtc
241 ttagcgttgt aagggcgtga tgagacgtat taaacgcgaa ggtatatatg tatacataac
301 gcaaattata aatatgaaaa tacaaatata taaatataaa tatacgaatt acgggggact
361 atattgggta tacatatata aatatatata tgtgagacaa tataataatt gtacgtgaca
421 ctaataaaat ctgtcacaca catacacacg tacatataca cacgcagcat atttctggca
481 aacgatcata ccgtatgaaa ctgaacaacg actttttttt aatattgaaa ggaagttttt
541 gagagagaat cggcaagaat gtaaagataa tttttaatac tgttaaaata ccccagacga
601 cgacaaatat caagaataac agttattatt cacttacaaa ataatgtaga tagaaaagat
661 tttaatgaat atcatgggat aaattatatt acaatattta acgtccttct taataaaaag
721 aaactacgaa tgcaaaaaat aaataaatat tgggcaattt acaatataaa aatactttca
781 tacgccaaaa attatttaag tttaagcaaa aaaattacaa taaattagct taatccgtcc
841 aggctttaac aagtttctta aatttcacga gcatcattga cagcaatttg attaatgttt
901 tccttttctt caatatttta catataagtt aagtagcttc tataattatt gaataattgt
961 tatatgtttg cttcttgtat tatttgtaaa ataacgcact cttctagtat ctatatggga
1021 tgcatcgaac aattttagta tttccgaaaa ataataaagc aaaaataaaa ttatggtaaa
1081 agaaaaaaaa agaataaaac aaaaatttgc attaaggata aagggaatac attaatagag
1141 gtttcagaaa gtaaagaagg aactgaatat ataatcagat ataacaaaat atcaaaatgt
1201 attgaattga attatgcatg ctccagaaag tgaacgataa taacagttgg ttttagatac
1261 atttcttatg tacacattat gtaaaataat tatagagaac tatataagtt gtacacatta
1321 tcattgtttt cctgtcttgt aaggataaaa atcactgacc gagggatatt aaaagaataa
1381 aatcctgtgt gaagcatata tagtactatg tgccttccta gtttttagaa tgctaaatgg
1441 agaatatata tgtagacaac ggaatttttg ttcctctatg gctgattatt tcgaccaagc
1501 ttttttcctt tcttttaaat ctaatcacaa taataaaaca ataaaaagat attgctttat
1561 gagataatct taatctatgg aaaaaaatat cctcgattcc aaacaatatc aattaattaa
1621 taaacaatat cagtaaattg tttcttataa taagaaatat ttagagttta cattgtacat
1681 aaaatattat acctaaacaa acatttactg aatcataaaa agaatcacaa aaaggaaggc
1741 aaggccagtt atagcatatg aatgcacaaa ttaataagtt ggtaaattgt aatttttaaa
1801 aattcacaat atgtatttac atacttacaa aaaatatcaa tgtttccagc cgagttgatt
1861 atatacacag tcgatgtcga gatttttgta tgactaacta tttaattatt tgaaaagaaa
1921 atcatatgaa aaaaatttct tgattttcaa tccacatcgc tgttcatgtc ctcgaaagat
1981 gatgaattct cttcttcaac atccttgtcc cagtctttca acttggctcc cataacaaaa
2041 tcatctcgaa gaacagtcca tatcttgtcg tctttgtctt tattatttgt ctgttgtaca
2101 agtttttcag atttggtagt attatcaagt ggtatgcttt tactgccacc cataagaatg
2161 tcgagaaagg catttttgtc aatactttgg agtacctgct cgcgttttct ttctaatggt
2221 cctgcttgtg ataatttttt gttaatattc gtttgttgct gttttactgc attaaatagt
2281 tgtacaactc ctcgtgtggc tattttttgc agcattcttt cacgttcccg atctgtaatg
2341 gatggtttta cccggacgcc aagactcttc tcctttgtcc tcggcttagt atgtacagta
2401 ggctctcctg tcttgatact agcttctatt tcagtcacat ttttaatacc atcaatttca
2461 aaagaaatgt cttccttttt ttcttttatt tttacatcgc acaatttctt tgccttggct
2521 agtactactg tcttttttct ctttggctta tttgttctta aaatcttttg cataacatct
2581 gcccatcctg cgtttgaagt agactcaggc gcagcatcag gtaataactc atctgtatta
2641 tcctccattt ctaagtcatc agattcattt tcctgataat cattgttacc ctcatttact
2701 tcttcatgta ttttttcgtc aggatgcaca aattccattt cagaaacacg tgggcagaat
2761 cgctcagcag gatgcacaaa gaattttctc ttggagaacc agtttcagcg ccgccggtct
2821 tcggactcgg atgaacgaat tattgtaaac cgaggacaaa ggagaaaagt cttggcatcc
2881 gaataaaacc atctattaga tccggaacgt gaaagaatgc ttatttcagt gtgcgcagtt
2941 aatttttcct cacactccgc gcattcgtca attatttgat tgcgctagat tcacttaaat
3001 tggctaaata catattccta ttcatcttat gcgtgacgtg caacggtatt cgcgattcag
3061 cgtgaattat tatctacata gatacataca ttgtcacctt gatttgccgc ctgcgatgac
3121 taacgtggcg cagctaaaag gaacagacct atagagaatc gacggccgcg catccattga
3181 gtcgcagagt cgcagcagac agacacagat agaaatcggt tcagtgcagt cgagtatgtt
3241 gtagtttgta gctgattgta atacaatcac tcttagtaca tcgtgagcaa tcgaacgagc
3301 tggaacgcgc gacctcgcgc gtcccgtaaa aaaaaaatgg caaaacaaag ttgtgcaggt
3361 tttgcgctcc tctgtctggc gtgcttcctc gcgcagacgg tgcgaacgaa cccggttaac
3421 atcccggtga aagcagtgcc aggaacgttg tgggtgaagg catggaaggc cctgaataaa
3481 catacgccga cgcatcaccg gtacagcagc ggccatatga taaatgcgca ggaattggag
3541 gagccgcctt acaagctata caagttcaca ttttatttga acccaatatg tggagcggag
3601 tcttgtccca gggaggcctg tacgatcgat ctgaaacaaa acagcgacat agaggacgat
3661 atagagacac tgaatgattc tattcagtgc atgtactttt actcggccga agcgcagaat
3721 gacacgtcgc aggaacagca gagctatcag gatcaggaag actctcagat cactcaggag
3781 agcgtgaccg aacaggtgaa taacaataaa agcgttgaat tgaatcacga aattcaagag
3841 actggtgacg agaatatcag accatttatt gctatgcgcg cttccggcaa ctactgtcca
3901 ggctgtccat acgagttgaa tccgaatctg ccgggtttcc tagtctttgc cgagcaagca
3961 ttgagattga tagacgagca gtccacgagc gattacaagc aaaagctgac gggcatcgta
4021 aaagtcaccc gctcggtacc ggtctcgtcc aatatgatac agtatcagct gctgctattg
4081 ataggcgaga cggagtgtct gaagaatgcc ctggagcagg agcaggagtg tccgttgcga
4141 acgactaatt cgctcaagct gtgcctagtc acgtttgaac aacaaccgtg gcagccgatg
4201 tctcttaaga tcattaggaa taattgcacg gatgaggaaa attctcgcgc caacaccagc
4261 actcagtctc agcagacgga tttggagagt cagtctctgg tgacggtcaa atataatgaa
4321 ggacaatcgt cgtctcactc cgaggtagct gacgcctacg aaggcttgag agatatgctc
4381 gacaattaca cccacgcatc ttcgacgtcc tcgaagcaat ccgaggaagc tgcagtgacg
4441 gaatctacga ttgtaaaggt agtgctgaac agaagccagg acgacgagaa aattgtaggt
4501 tttacggaca aggcaaagga attcggggaa ttcttggagc attttgatct gcccgtcaaa
4561 gcggaagatg ctatacctga tatgcgcgaa cctgtaaagg aggag
//