LOCUS LJ632441 1280 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67624.graph_c0_seq12.
ACCESSION LJ632441
VERSION LJ632441.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1280)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1280
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67624.graph_c0_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 435 a 215 c 245 g 385 t
ORIGIN
1 atcgaaatac acgggagatt ggaaaccctg gggcctataa tctcttatgt aaattttgta
61 gacagcgttt gtggcgtcct cgctgtacca ccccaggcca aatggaacta tcaagcaaca
121 tccgtcggta aaatggttga taaatctcgc atggtacata ctggttcatg ctttgttttc
181 gttacatgtg caaccatgtg caacgcagaa cgtgcgcgga tttatatttc aatatatttc
241 aaaagtattc agcagtgttc agcagtgttc aacagtgttc agattttgtc cggaaagaag
301 agaaagaagt agttcagagg cctacccgta caacctattg ataaggtaag tgaattttat
361 tatataacct aaaataacgt aaaagaaaaa aaaaccaaac caataacaat tgagtttaat
421 aacaactatt tataaatatg agaacttgtt atttgactat ttagaaatat gagaaattgt
481 tgcgtctctg gatgttcttc gggctacaaa gctcctcgtc atgagttaga atagccgatc
541 ggagaaggat agcaccggta cgtcagtcca cgatggaccg cctctccgct tctggtctga
601 ctggttgtca ctggtcgtaa aaggagcgtt aattccatga gcggtattct atcaggggct
661 attaatttct gtcaactcga agaatgtatt aataaatgga ccttggagtt gaaaaagcaa
721 gataaagtac ttgtaaatca agcgacacaa gttgatgctt gggacaaatg gttgataaca
781 gttgataaca aatggggaga aaatactaat gctgaatcaa gaaattgaaa gagtgaaaat
841 cgagtagcag caattggatt acgttattgg acaacagaat gagttgcaag aatgtttaat
901 accattagaa aaggagctag cattattaag aaacaatagc atcaagaaaa aagtagcatt
961 ggaagaaaac atcacaaaaa ttagtgccat ccttcacatg attttcttca taatctcagc
1021 gtgggaatac aacgccctga ttccaagcaa ccggatatgc gattaaggat gtactggcgg
1081 taattgctgc tgtttatttt tctacactct tatacatcta cttgtacata ttcactaaat
1141 accaacaaat ttttgtattg ttaaattaag attattagtt tttacatttc gtaaacctct
1201 tttttaaatt agctgatatt attttttaga aactacttaa actatctatt tcaatttacg
1261 catatatata tatatatata
//