LOCUS LJ632006 2659 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68141.graph_c7_seq1.
ACCESSION LJ632006
VERSION LJ632006.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2659)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2659
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68141.graph_c7_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 893 a 396 c 432 g 938 t
ORIGIN
1 gagggggggg attgttttaa aaaaagaagc aaaacagaat cagaagacag acagaaaagt
61 gatcaagata gcttggttga gcacagaaaa agcctcgaat accccgaatt tagtgcgtta
121 tgaaagaagc ttgcgcaagt aatggtatca caatcgatat taacagtaat gattaagaat
181 aacaatatta atattttcgt ttaacaaacg ttggcaatta attcaacgaa cttgctgaac
241 aagattcctg aaattggatt tggatcaagg gaactagtac gcgttcgtta cggcatcact
301 gaccccgtgt gtactatctg tatattaaaa ataaaaactt gtatggtttg ctctttgtat
361 catgttatat accttttgca ttcaggctgt gtttaggaag cgcattgatg ctattgactc
421 attctattct tgttctaaat ataatgaaca ataaagatag aatgtgataa tatggaacgt
481 attgcctgaa cacagccata cagtggaaaa ggtatataat gcatgtgcat gatgtatagc
541 gtgatgagca taagagagaa gaaagttcaa aggatttagc tagaaagaac aaactgtaga
601 catcgatgat gtatctaata ttaatcgtcg tatctaaaat cgtgcttttt atagtgtcga
661 taatttttta tcgtgcaaaa tatatttttc gatgtaaaat tccgaaaaac tttacaatat
721 gagatacata cagtagcatg tttttttctt gcgcagaacc agaggcaatt acaatgtttg
781 gatgtcccat tcgatgaact ttttttctct atttgtacga gcaaagtttg tataatacag
841 tgttgacctt gtacgatcaa tattgtctga caaatactga taatattttg atcgtatatg
901 attaatattg atgtaaaata ttcgaagtat tcggatttct tgattctcga gtctctattg
961 ctggtaattt gccgtactct ttatcgtctt accataggaa tatttataac gcagtaagaa
1021 ttatacaatt gcaaagctgc tttttatgct taatgcaatc atcagagatt gtgtcagtaa
1081 atttaaatta aaattttttt tagttaagca aaaagagttt tgtcgcaagt tctgaaatat
1141 gatttgatct ttcccatcta tttgtttata tttgtaattt gctattaaca tttgctatta
1201 tttgtatatc cattgtattg gattatccaa ggagtttgtg tgtcacattt acagaaagta
1261 atcgctagaa ggatacgagt acttgaataa gtttgtgatt tttttcgaag taatctcttt
1321 gaagtctttt tgactttagt actaactgac agagaaaaag tctacacctg cggcacacac
1381 atttcggaaa atccaattct ttagtatctt actttagtaa tcatttatac attaaaaatt
1441 tgagtttcat tatatttctt tcttatagct agcagttgta tctcagacta cgcttccaat
1501 ttaatgcgtg taataattca atttgtcaaa cgcgtgcgat cttaattttt gcaatcgcaa
1561 tctagttata ttatcgaaaa taatctgcga gaaaaaatac aggctaatct gaatatggtt
1621 attggttgaa tccgagaaac tttgcgttag cattatgact accgttttat agttataatg
1681 ctgacgctcc ttacagtaga catgataaca agtgtgtaac tttaatcctg acaatatgat
1741 cacaatatcg agtattgtga tcatcgaagt cgattttcaa gttgattgat cattgaagtt
1801 gattgaatct tgatgaagaa atacaataag acagagaggt tcaaatttgt tgaacttctt
1861 ttacgaaatt tttcattaat atcaggacat aacttaataa tagaatcctt ttaatgtttt
1921 ccacaatcaa taaaagctat gaaatcagta atgttatgtg caatgtatta tatatacaat
1981 tgatttcata gtatcactga taagctactt ttaattttgc aatctacatt atttctcgcc
2041 aattagagat acagatttca ttctcaattt aacttctgat atgaattaag gctgataaac
2101 tgaaatacta atgacaaagt atcaatgctg catcttttat tttattgtgt gtggttctct
2161 ctttacgaga aatagaacgt cgccgcgttc atctgatggc aataccgcga attgctatat
2221 atcaaatttt gtacatccaa tcagaaatca ttaactaaat tatcatattt aaatgttctg
2281 gttgcacacc aaaatattta aaggaatgct aaagtcatga gtttcaccga ttgaacaact
2341 tatacatata agatttacaa taaatacata cgatttatga aacgtcaata cgtcagtaca
2401 tactacaatt actacatcaa tattgcatgc atgtacataa ccgtgcatca attcgttggc
2461 tggtattcat aattgatttt tatataatat ttaatactgt tttaagatat caatcgtcaa
2521 tcaattatag tcgcattggc atcttaaaac attacttaaa acttgaaata aaaatcgatt
2581 atggctagta ttcatagtcg attcttatat tcaatatctg tctatttcaa gtactgtctt
2641 aagatgtcat caaccaatc
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