LOCUS LJ632002 2817 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68141.graph_c6_seq1.
ACCESSION LJ632002
VERSION LJ632002.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2817)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2817
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68141.graph_c6_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1017 a 405 c 468 g 927 t
ORIGIN
1 ggtggactga tatatggctg aacggaggac tcgctgaata ttttaaatac tacattattg
61 ataagatata taaagattgg caagtcacaa actttttagt tatgaaaacg ctaaattcaa
121 ttctttatat ggacagtttt gaacatacgc aacctcttaa tctggagcct aatactatta
181 gagaaatgaa tttaaaacct tcacaaggtg atcaaaaagc ttttctgctt ttacggatgc
241 tatcacattg cctctccgat gatgtgtttc acgtaggcct tattagatat cttgataaac
301 acaagtacgg cgtagccaag cctgaagatt tatgggacat tttgcaagat gcatttgatg
361 aatcggcggt gcctcagaac aaattcaaag ttcaagaagt aatagacacc tggataggac
421 aaaaaggata ccctcttgtt tcagtaatca aagatcaaca cactggaaaa acaaaaatta
481 cccaagaata ttttcaaccg tacaaaaaaa tgagtttacg taagaatgcc aatagcactg
541 cgaattcaag atggtgggtt ccaataaatt ttgcaactag caccaatccg gatttctcgt
601 caactttagc tacgcactgg ttgtcaccaa aaactgaaga gcttgtaatt gatggtattg
661 ccccacaaga ttggatcatt gtaaacattc aacaaactgg tttttatcgt gtaaattacg
721 atacaacgaa ctggttgaaa attgcagact atctggattc tgagaattac acaaaaatac
781 atgtattaaa tcgcgcaagg ataattaatg atgcaattca tctcgtattt acgaataaat
841 tagaacctag aattctcatg gaagtcacaa aatatctgca acgtgaaacg gattacgtag
901 tgtggtactc attatttaaa attttaagag atgcaatctc gttttttgat tatagtggag
961 gaggtgaatt gtttaagtca tatataaatg agttgatgac cgctgtaata atgacacacc
1021 tgcaagattg gatgcagaat ccgaatgaca attatttcaa aaatttaaca agatatgcaa
1081 tttctgatga tgcatgcgcc ttagattttt ctttttgctt atggaaagca cgtatacaat
1141 tacgtgatta tttaaaaaat tcaacggtac ttgcaaagag aacttcattc caaaggaaaa
1201 gatggatatt ctgtaatggc gttaaagaag cagaagaaaa tatttggaac gaactactgt
1261 atatgtatac gaacaagtcc gaaccaactt tatactgtct tggacattcc aagaatcaga
1321 gtattattgc gaaattttta aacatgacta tatcggaaca ttcaccattc gcaaaaaatg
1381 atatttatcg tgttatttat tccgtattaa atggaggttt tccaaatatc gacgtggtga
1441 taaattttgt tatatcacac tgggataagc ttacaactgt cgttgaagac ccgatgtatt
1501 tgatacatga tattagttgg agcgttgtat ctaggaaaca aatccaaaag ataaaagaat
1561 ttctaggtaa gcttggaatg gaagtaccac aaattataaa acttcgagag caaaatatag
1621 aattggcgga gataattgta aataaaattc gtgtgtggtt agtaaacaaa agtttaaata
1681 ttacaataaa ttgatatctt tattaacatg tttattcgat aactttacta ataacatttt
1741 aaatcagttc aacaagattt gttataacta ttatcattat tgggctgaca taacttaaaa
1801 ttatgtacat gtaaatgtat ctcattgtta gataagataa agatttaatt ttaaatatct
1861 agataaagga taaaattata tatggtttga tttagatggt tttaaaataa tatcattatt
1921 aagtaaaacc acttagaata tgaaaacagt aattcatatt tttatttctc taaatcttta
1981 tttcttagaa acaaaagttt ttcaaataat ataatttaac aaaaagtatt tttttttaat
2041 tgaatcaata tgtataaata aaaatcaaag ttaaaaataa aaggaatatt aattcagtca
2101 taatatgtat aatgattgac aaacttttcc gtaaaagttt tcaaatttat agtttaagag
2161 caatttttac atagcactac cttgacttgt gcaatctgat ctacgaaata cactgtcagt
2221 attaaaaatc tatgatttat tgtagatttt tcagtattgg cagcgaattt tgggacgtaa
2281 ctttattgtc attactttga aaaatgtttg tgttagaata aatggcaact tggaagttga
2341 ggctaaggat aatatgtcat tttcattatt gttctcatta ctttagataa tttgaaaagg
2401 ataatatctt tttttaaaga aagataatat acattataat aatctagata aagataagat
2461 gaagctattt ctttatctag ataattctat atagataacg ctaatactgt gaatgtgtaa
2521 tatactttag ggttatatga acatattcat tcaatggcgt tgcagctcag tatgagcttt
2581 agactattta ggcctgttct tgttagctga attgactgca ctaattcgaa aacatctttt
2641 tctctttacg ttaagcgaaa aaagataaaa tagtgcagcc agttcagcta aaaagaacag
2701 acctattggc acgcagcaac gctagggaat aacgccatct tccacgcgat attttactag
2761 catcactccg cacattctgc taaattgatc tttcatttca cgtgttgtgt cggagaa
//