LOCUS LJ631996 2330 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68141.graph_c0_seq1.
ACCESSION LJ631996
VERSION LJ631996.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2330)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2330
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68141.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 706 a 413 c 371 g 840 t
ORIGIN
1 tttttttttt ttttttttta gtattatatg tatattgtaa tatagttagt attatatata
61 ttgtaaatta tatattgtat tataaatgcc acaagggaac aattgaaatg atcggcattt
121 ttattctttt tttttgctat aattaaaata tacactgtgt catgggtgaa acaggcgaat
181 agtaattaat agtaacaaaa tatctgtctc gtttcccttt aattttactc tctctttcac
241 tctctctact ctaccccttg tcttcgtcgt tttcaatata tatttccgca cgcagcaaat
301 atagtataca cggtatacag atttaatttc aaagacatta gcttgactcc tcgatcttct
361 cgagtgaacg cctactcata tgagaaatct gttaaacttt tataacgatg ataagttgag
421 ccaagccgtt gatgcctttg cgacgtctga gaaaaaacct tttttttttt tttgaatgta
481 gcttcttcgg cattgttaca atataatttc gatgtatcta aatgtagtcc cattgcgtct
541 tatctacatt ctttacaatt atgttaatcg gttaatcctt tcaattttcg tgttcgaaac
601 cgcaagttct attaattgtc aaggttttct agtgcctgta tcatcacttg tgttaacagt
661 cttttcacga tatgaagaac agtctttgca cggcgaacag gaactcgctg ctcgatagaa
721 atgtgaaaga aacattaaat tcgcttgtca tccccggtcg cctcgtgcct taaacgttct
781 ggtcgcctgg atcagttagg gaagccttta tctacatttt acactctcat ctcatcaatt
841 atcttcacgt atgtctagcg cttatcctat tttcttttat ttttcataca gaccgagaca
901 cgcagaccgt acacagacga cacgcaaata atagaacttt gtttcaagat aggttttatc
961 catcttacgt tattagagac aaactgccag gcaattaact atggcgatat acatttttat
1021 gatacattta ggatatcgat aatatgacac gatgctgcgt taaatacatg tgtaaactat
1081 ggttatatcg caaagatgcg ccgtttttca cgttactact agatgtgtta tttcgtcgac
1141 aggaagtttt cggttggatt cgtcgctcgc gcgtgcactt cacgtgtata cccaggacgt
1201 catattttaa ttatataatt ttttaatttt ttttttattt tctaaagatt aatttttcgc
1261 gtttccgcgt gtttcgtatc tattacaaac acacacgtac gtgtgggcac acgtgcacgc
1321 atgctgtgca tgaatgcact tatgcacgca tacatacgat atatgtataa tccaatctcg
1381 atagtaacta taagttatca ttagattact actcttatga gactaaatta cattttacat
1441 gttattcggc aacatttcta tcatgagtta agcacaagaa agaaagaaat agattttgat
1501 ccttgaatat taactattcc tttttttcct ctttcaataa agcgagagct tgtgattgtg
1561 aagagaacat gaacgtgatg gagaagaaga tcaaatattt tagttaattt acgcttttga
1621 ccataaagct ttgaaaaaag gcgcttcaaa cgcgctccga aattaatgac gatttctttc
1681 aaatgatgtg atactttctt ttgcaatcat tatgactcgt gagtatacta tgaatgtaat
1741 tgtcacttta tccagtctca aaagacgcgt tttccacaat tatcgttcac aatccatcct
1801 tttatcctct aagctagacc tctttctttg cctctctcag aaggatatca gctagatttc
1861 taagcagaat cctaaattaa tagaaattca tgacagaaaa aatgggctaa tccaaacggt
1921 tactggtgca taaatgaatt ttatgttatc tcagtaaagt ggttttatat agtatccttc
1981 gaagataaag agtaccgaca aagtagtata aaagactgtc ttatggaaac tcgcgcgtga
2041 ttgtcaaaac gtgaactcga ttagctcacg atattgatgt cgaaatgaat acatttcaat
2101 tcattttcat ttactgtata tatgtatctc aaattcttac aaatagtaaa aatgtttttc
2161 agcgctgata aactgacata ttatagacaa gaatattaga aatgccagtg ccacaattga
2221 ttgaaataca aaatatgcta ttcattattt ggttggattc atatctatat tatatattct
2281 aattgttttg taatttaaac ggatttgaaa aatctgaagc gcgaattcga
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