LOCUS LJ631517 1885 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67783.graph_c1_seq12.
ACCESSION LJ631517
VERSION LJ631517.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1885)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1885
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67783.graph_c1_seq12"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 605 a 343 c 292 g 645 t
ORIGIN
1 tactcacgca ggatgaaata ctcgcatcga atgccgtcgc tgttaccttt ggcgataaac
61 tgctgggcgt tatgtcgtgg atcatgccgt tcttcgtggc atgctcgact ttcggagcgt
121 tgaacggtgc gatcttcgca tcgtccaggt tgttctttgt cggtgctcga aacggacacc
181 tccccactgc cattgccctc attaacgtcc gcaacttgac gccaatgcca tccctcattt
241 ttctttgcat tatcaccctg gtgctcctca tcatagagga tgtctacgta ctaataaatt
301 atgtcagctt cgttgaggct ctatttacta cactctccgt gtctggtctg ttgtggctac
361 gttacaaaaa gcccgatctc catcgtccga taaaggtttc tataattttg ccaatcatct
421 tcttcataat ttgtgcattc ttggtcactt tcccatgcta tgtctcaccg tgggaagtag
481 gcataggcat aatcataatc ctatctggca ttcccatgta ctgtatcttc atcgattgga
541 aagcaaagcc tgtctggctc atcaatgcat ctcataattt caacttaatg tgcgcaaaac
601 tattcatgtg cgtggaagaa gacaagacaa cgtgagtatg caaagctcgc agtaatcatt
661 gtgaaaaatt tcaaatctgt ggcatccgaa tttaagagtg catttcgcac gcgtcgtact
721 ttctcttagg taggtaaaat acattgtgaa tatataaata caatgtcgat catagtcgtc
781 taccaaacgg ccacatgatt gcacaagtat taacgataat aagtaaacga gtgacactat
841 actgtcgttg atagactcaa tttttatatt cgacatatac atatatatat tattacggaa
901 atacttttta tacatatata ttttcgtgat atttatcgtt taataaataa taagtgcctg
961 tacgtcccat taattgctat agtctattaa catgtaaatt gcattcaagt gccaattctt
1021 gatactgccc ggcgtattca aaatatattt tttaaagagc tatttaagat aaatatttaa
1081 tgattacata atttgtacac gcacttgcca catttttatt ggccatgtcg gattacacag
1141 gcataatata aaataatata actatattta ttaaggcata atgtaaaaga atccagcaag
1201 gttattaaat tatatcaaaa aaactggtat aatttcgatg agtccaattt tttaagtact
1261 ttatgtcaat tagcatttag acacagaatt atttacgaga actgtcatca ttgtatttaa
1321 tcattcaaat tcagcgaaat tatactgttt ttgagtctcg aattgtatat atataacgaa
1381 ataatgtaaa gtctgtacac attgcacgta gttagaatta aaaatttaca aagactatat
1441 aaagaattat gttttgatca tgaattatac gtacaatatt atctaatttt gataattaat
1501 ctcagacaat taattagttt gaatttcatt ttttaatgga aaaagaaatt ctaaagaagt
1561 gtagatcttt tcttactttt aattatttaa aaaatatatg tatatatata tatacaccaa
1621 gcaaatcaaa aactgcttac gtgaatataa ttaacctcaa ctcccatcca caataaataa
1681 tatgtctctt gtatagacaa gattatatat tatgcacttt tttcagccga attcgtttgt
1741 cccgtacaaa aacgcgccga acaagtgtat tattaatata tatatgcagt taaaaatata
1801 tattttgcat taactagagt caatattata ctcttacgag tgctgtacat taaattttcc
1861 aagtgttaaa tacgcatgat taaca
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