LOCUS LJ631326 1146 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67645.graph_c0_seq1.
ACCESSION LJ631326
VERSION LJ631326.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1146)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1146
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67645.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 426 a 148 c 143 g 429 t
ORIGIN
1 gcaaatccga aagtatttca aatttcctcg atataataag atttcgagga aaattgagat
61 acgcaatgag tacaaagtcg attttgaaat ttctggtatt ttatatactg tatatatttt
121 aagtgaaaat gtatttgtaa gaagtatatg tctgatttta aaattccatg ttatgctaga
181 tctttatcct tcttaacaat ttatgtaaca taataataca ataaatcttt ttaattaatt
241 acgttgaaca aatatttttt aatgattctt tttccaaaat tatttttaaa taattgaatg
301 ctttgaaaat gtttgtacgt taataatgtt agttaaaaat tttttgtgat ttattcaaat
361 aaaatatgaa catcacgtca tttactatat tactattgtg ctattgttat aagactacaa
421 acaacaataa tacgtatatt tctctagcaa agtaagagca atgatatatg caaagacggc
481 aatcttttat cagtccgatc agcccagcct gattaattcg atagattatt gtaaacataa
541 acgcagcatt agtctgcaca ttattaatat acatatacat attaatatac atatataatt
601 aatgcattat acatatacat tattaatata catataacat tattgcatta cttcattaat
661 taaaaaagtc aaaacaaaaa aatcgacttc tttcttatta agtaagcatt tattgttgta
721 gaagttggaa gttgcttaca tcacagagcc aaaaaataga aaaaagaata aaattataaa
781 attttaaacc ttgtatcatt tgttaagtaa tttgtaaaat aataaaactt gtgtgtaatt
841 tgttaactaa gtctattcaa ttatatatta tcgtgcactt ttcgaaatat acacattatt
901 gtaaaataca tttatgcgca tattttttcc ttgtctaaca caaaaatagt tttcaagatg
961 ctatttctga atgcatgtaa aactaatctc acaatatagt tgagattgta ttattttatc
1021 tgatacatat tagttatgac ctatctcttt tagattaaac aataaaagtg tgttcgattt
1081 actatccata aataaaagtg ttgaattgtc gaccggggcc ctcgggggct gtcgacgccg
1141 ttgaac
//