LOCUS LJ630704 1939 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67999.graph_c1_seq5.
ACCESSION LJ630704
VERSION LJ630704.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1939)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1939
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67999.graph_c1_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 711 a 250 c 261 g 717 t
ORIGIN
1 tgtgtgtgtg tgtgtgtgta atatttaata cataaatata tattgtatat atatttatat
61 attaaatttt atgtatataa ttatatacca aatttgtata tatttttaca tttttagatg
121 tatgaatttt agagaaagat actattcttc tatcaacatt ttattaaaag aaaaaaggaa
181 atcaaagaat ctgccattag agaattaaca atctttccgc tctttgcatc ttgttcagaa
241 tggatgtatc tagtcgaaga tattgtcgcc attttatcat gtactgtgtg aaatatatag
301 cttaagtata gtatcagttc atctcattcc caaaacaatt ctatatctct gcattcctta
361 tatccacaat tttcaatttt tccaacctat tttaaaccga gacataggat gaaaatcggg
421 accaacttcc ggatccgttg attacaagtc gattgtattc acacgaaacc accccagata
481 atcaagcgtg atatagcata tcgagcaaac tagtgcattg catatgttgt tatatactta
541 ctgtacattt gctgacatcg aaagaacata ttatgaatgc agcaacacta ttgatacatt
601 atattgttag taacatgaca gcaacaattt tgtaaatagc aaatttaata ataaaatgtg
661 gctatttact tatttgtcgt tgatagaatt tgaattcatt tgagcgcaac ccgacagata
721 taatattgcc tcgaatttaa caaaattaga tgctgcaaca ttgttgacaa tatgacaaca
781 aacttattgc atttggctat ctggaacata gtatatcaca ttgtatatgt cactttatat
841 tacttgtatt ttttcacaat tatatataag ctgttttggt attttagaaa tataacgaag
901 tcatatgatt catacttata atttttattc caatggaaga ttctctgatg aatgaatttt
961 attattgtat ttttagatca gtagattaaa aaaatattct atataaaaaa tttattaaaa
1021 aaaatgtaca gctaagaaat tgtctattaa gaattaacaa ttttttctat gtgtctctta
1081 cagtatatat cgtatataca gtatatattt tatttttctt ataattagca ttacagaatg
1141 taaagtataa tctgagaata attaccctat ttttttgttg cacaaacaat catcaaagat
1201 gatttttcac tacggttaaa agtcattgct attaattaca tattgtaaat tattgattgt
1261 tttataattt attaatatct aaggacatta tgtatttaga tttgataaat attttctgga
1321 aaaaaaaaaa taaacgggag aaacacatta aggtgttagg ccacagtagc gcacaaagaa
1381 aacagcctat ctttgacaag aatttatgga catatgaaat tcaagagaga aaatttaaat
1441 aaaccacttt attgcttatc ttttattgtt gaaacattga tattattttt tttataataa
1501 aaaatggcgg cgatacgtat ccgcttgtaa aggctttcta ttttgacatc acacgggcga
1561 aaagatttct tccataattt tttgtctaga ctaaaaatcc aaagatattt tgaatctaga
1621 tatattttct atagaagtac ggaaattttt tttcgttttt tgcaaaaatg gtgcataaat
1681 gaaaaaatat tgtagtgttt aacaaaaaaa aatgacgaga aaattattta taacaaaaaa
1741 agtttacagt gaaattaaaa ttccgtaagt acttccgtgt agaatattat tttaaaactg
1801 cttaaaattt gaagttaatc gataaaaatt ggaccgagtt atccttccgc ccaatttaaa
1861 aaacataatt ttgagaaaaa cgtgttttaa gtttcaatta gtgtttaata agctttaaca
1921 gagcttaata tctattaca
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