LOCUS LJ630697 1191 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67999.graph_c0_seq1.
ACCESSION LJ630697
VERSION LJ630697.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1191)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1191
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67999.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 378 a 215 c 237 g 361 t
ORIGIN
1 aggatgtggc cgttaagaag ctcaaaacgc aagaggattc agaaaatgtg cttgatttcg
61 agagggaaat taaaatcatg gagaggctca aacatccaaa catcgtgaaa attctgtgct
121 cagtggatcg aattttggtg atggaattca tccaatatgg ctcgttgttg agttatctaa
181 gctcgcatcg gtttagcctc gcatataaaa cactattagg cttcgctcta gacatcgtcg
241 caggcatgga gtatctcggc agtatgaata ttgttcacag agatttggca gcaagaaaca
301 tcttagtagc gaacgaggat cgagtgaaaa ttagcgactt cggtcttgcg caagtgatag
361 ctgcgagtga ttattatgtt tttaaaaccc ttcgtaatat tccaataaaa tggtatgcac
421 cggagagttt gaggcataat aaattctcaa cgcgttcgga cgtatggtca ttcggcgtga
481 cgatgtacga ggttttcagc tacggcgtcg atccacaatt atcaattaga acggatgaga
541 aagaaatctt aatgacaact ataaccgacc tactgaacgc attagaacgt ggtcaccgtc
601 ttccgtgccc agctaactgt ccacaagaaa ttcataggaa actgatgctc tcatgttggc
661 agctaaacag tcatgaaaga ccgattttcg ccaatttacg cgaagatatc gagcagctgc
721 tttgtaatta ttagaacatt tctttaccaa tcgtctgttg ttattttaga aatacatgac
781 ataacccagt cgtgattctt gaacagccct atgaaattta gtacttttta gcgtccatgt
841 gatgtcgcca tgacgttgat aacatacatt cagctctgtc aatatacatt ttgttatggg
901 tttcacactg ttacacactc ttgtgtattt tacacgataa agctgcaaaa tataaataag
961 attgaatgtt gccagcaccg aataataact tgacgtcatt aaatgaacac tcatatggaa
1021 atatgggggt ttcatagagc tgttcttata ttaatggaag attctttgat aagtcaacag
1081 ttaacttatt ttttgcaaaa aaccgttttt attgtttatg aagaattata tataaatata
1141 atacctacgt gtgtgtatat acatatacat acatacaaat atacatatac a
//