LOCUS LJ628986 2931 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68174.graph_c4_seq2.
ACCESSION LJ628986
VERSION LJ628986.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2931)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2931
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68174.graph_c4_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1014 a 426 c 476 g 1015 t
ORIGIN
1 gaagaaaatt tacttgaaaa atttaaagta gttttttcag aaatatttat aaatttaaaa
61 aatgaaaaat tctttaaaat atgatgtatt acaagaatta ttttcaccag gaaacacttc
121 gttttacgct ttttataact cgtttcgaac gatcttcgta agatgtttgt gttaggtcgc
181 tctacgagtg tactcgacat cccaggcagc tcgtatttaa agatgatttc atgcgcgtat
241 cctttattga agcaatcatc tagtatatat tacgatctca ttggaaaata ttattttaga
301 gttaatcgat tgcaggcaaa taaatatggg tattatatga taggttattt aacgtcacaa
361 agtcaacgat ccgttttttt ggacatcgat cgcgagaggc acgcgaaact cgtacgcgga
421 aatttttccg cagaattaaa cggtacgata ctttcgagaa tctaccgaaa tctgtcgttg
481 tgcttcgaga attcatatat ttcgtcagag ataaaaagat tgcgttattt gatgaatatg
541 gtttgcttga aagtaagctt tattctctcc cccgtgtcgc tcttgcgatt tgaagtatta
601 ttgataaaaa aaaagaaatg tttgtataca gatattttta gtgggatata tacttcatat
661 gtggatttgt atttttactt actcaaaaac gcgatcggaa acgcggctct taagagaaat
721 tttataaact tataacgcaa tgctcaattc tcaccggcgt tgagaatcgt cgagatatat
781 atacatatgt ccatgtttct atccagatac attttatata aaccacttac tgccaattca
841 ttaatgcata tctatcaaag tacatacgta catatttcct tccaattgct aaactctcta
901 tctgaagaaa catttaacga aacgcgcgaa ggcgtgttcg aattccaatt tggatcaatg
961 aaatacaacg atcgtcgttg ctgcgaaata ataatatgct tgtagaattt cgaattgtac
1021 tcgaccactt ttgggatact tttatatttt catagcgttt cgaggtattg tacaaagatt
1081 ttgtatatta aggacgttgt acgtgatgcg agacaggaag aattcgagtg atataaatcg
1141 aacacacatc tccttttact tcaagacaaa attaaaactg aagattaaat ttatactaaa
1201 aggagacata tggtttatat ggttagatta aaaagtcgca aaaatgctaa acgacatttt
1261 aggagccatt cttgaaatta actatatatt aattatgtaa ctctttatat acatatatat
1321 atatcactcg attttcagta gcttgcataa tacgaattcc gatgtagcat cccaattttt
1381 ggatgcgctg caaagtaaca gacgatactc tctctcacgt gtaggcgctg ccaaattttg
1441 tgactgactt ttcacggatt tggagtcttt cgagcgcgat gggaaagata acatttatat
1501 cgcaattttt gtattcggag tattgcgtgt tacttgcgat gcgataatac gtagatgata
1561 ccgcccaacg cgcgatttgc atacaggaaa attttaagta aatactcttg tttcaagtat
1621 ttcatagatt tatgtctaaa aattattata aaatttatta aaaatttatt ctaaaaccta
1681 gaaaaattta atactttaat gaaggtcatt aaaacaaaag tttaatttgc ttattatttt
1741 aataaaaatt ttctttaata aaattttata atatttttcg aaagaatata acatttttta
1801 aagtacacat gataatgaat tttttaaaaa ttatgatgaa tataatttaa gactgtaata
1861 aaataaatat tctttgtcag agataatatt aaaatcagaa aaatacagtt tatataataa
1921 ttgctcttag aaataaaatt aatatttttt tctgtatgtg gaggtaaaac tttatgagaa
1981 tcgccagcgt tcgatcgtac tgggcttcgt tcgtcaagcg taacgtaaca ttttttattt
2041 tttacatata taagttatat ataagttagc tgtaaaagag aatgttttat tgaacgagcg
2101 cgtgatacgt ttttctcgaa aagacactaa cgttttgcac tgtgttgttg tttttacgtt
2161 gacagtgtgt cgagctttgt gcaagctttt tacaatcgcg aaaggaacat gtgagagcta
2221 tacttataaa gagaacagct tgtacattaa gtatatacat atacatgata tatatatata
2281 tatatgaaag ttgtatctat attgcgctgt tgacagaaaa gagcgtcggg tactttttaa
2341 ttaaaggaca ggcctactga gaaggcctgc gagaatattt taccacaaaa gtataattag
2401 cgtatagcta tacgtagata gcgtgtatat ttatctaaat aagattaata ttatttattg
2461 attttttttg tttacgcgcc gatttttccg ggtagacaga cgaaaacatt agaggctggt
2521 ttgtattcga ccgttgcctc gcgtaaaata cacctccaat tctcattact catcaacgaa
2581 tcgatcattc acatctgcat ttataaatta gttaggtaaa ttaattatct agattagcat
2641 ttcatatgaa atttgacgat atataatcgc gatgaagaaa acgatcggct tatcgatgta
2701 cataaatatg aaagaaaaaa caccgccact ttatataaga gatgatcaag tatttatata
2761 tatatatata ttattatata gccattatat atataattct tatatttgta cgatatacga
2821 tataagaaag cccgccccga gacaaaacat tcataacaag tgtgtgataa tatttgtaaa
2881 acttgatatt caataaacaa ttttatgttc tttacaaaaa aaaaaaaaaa a
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