LOCUS LJ628983 1665 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68174.graph_c2_seq10.
ACCESSION LJ628983
VERSION LJ628983.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1665)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1665
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68174.graph_c2_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 592 a 266 c 335 g 472 t
ORIGIN
1 aacgcagagt acatggggac tttacctaca gagttagatg actggaagaa tggcggttta
61 cgtatgctgc gtatggacgc attcgaggag aattcagtga ggatatttgt atgttttgat
121 aaatgtttcg agtatcgaac aattatacgt gattcgtttt gcaaagttta aatttacgat
181 gaataatatt cggcctacta acacaagaaa gaagagacgt cgagaggcgc aatgttacga
241 aagtccattg agttctaagg aaaggcactt gcgtaatctt gtctacctta tctatggaga
301 aaggaggtta actcgtggaa tggtgcaaaa gttgaaagga caaaatgcag tctccttgag
361 cagagaatct ccttcgcgga atagtataat cgttataaat gacagtgata atgaaacaag
421 ggataatgaa acaagtagga aagataaaga agaagacgct tcttcactca gcattatcga
481 atgcagtcca acaatgccat catcttcgcg aaaatcaaga aagcaaaaat cgcaaaactc
541 tcttaggcaa aacaaaaaca gatcgttatt atcactatca aatttatcca ttgtagaatc
601 atcgagtaca caatctcaat gcaatggaga aaatatagca ccgtcaaaaa tagaagacga
661 tgtgatagag ttatggtctt ctctcaagaa ttcctcaagc ccaaataaac acaggaaaaa
721 tactaggtac tatcatgatg agccaaatga aaaagtaaat tttgtgatag atgtaaggcc
781 aaacctgaaa aatctagaat tactaaagac gaatacagaa cctgtacgga agaaacgaaa
841 actgtgtcac cattttgata aagttacgtt gtcatcgaac aagagtcgaa gaaagagaca
901 acatgccaat agtgcagatt caaatctctc agagtccaat gcacgatctc gtgaagaaga
961 aacaaagaca attgcatctg gcgcacgaaa tagtcgagat tcaagtcata aattaaggga
1021 gataattgtt gatggatgca atgtagcgat ggcgtatgat cttatttttc ttatccatgc
1081 attttaatga caagttttcc taaacttatt ttgtgaataa ttatataaga ttacaaaaat
1141 tatacatatg caatatagta ttatatacat tttgttttag ttgttatttt aagtaaatta
1201 catttttaca ttttagtcat acacatcatc agacgttctc acttaaaggc atcgaattag
1261 tggtaaatta ttttaaatta aggggtcatg atgtgaaagt ctttttacct cagtatcttc
1321 gaaaaagaga atatacgcta cttgaagaat tttatagaaa gggtatagtt gtctttacac
1381 ctagtcgcaa aattgctggc agacaaatta catctcatga tgactggtat atcttggaat
1441 acgcaacagc gtgcggagga atagtgattt cctcggatca gtatagagac tggtacgagg
1501 agaagccaga atggcgcgat acaatcttga atcgtttatt aacgccaact ttcgttgggg
1561 attacgtcat gttcccagag gatccattag gcaggtttgg acccaatctg gagacatttt
1621 tgcgacattg aaatacaatc ttcgttataa tatatatttt gagta
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