LOCUS LJ628979 1502 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68174.graph_c2_seq6.
ACCESSION LJ628979
VERSION LJ628979.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1502)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1502
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68174.graph_c2_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 537 a 251 c 320 g 394 t
ORIGIN
1 aacgcagagt acatggggac tttacctaca gagttagatg actggaagaa tggcggttta
61 cgtatgctgc gtatggacgc attcgaggag aattcagtga ggatatttgt atgttttgat
121 aaatgtttcg agtatcgaac aattatacgt gattcgtttt gcaaagttta aatttacgat
181 gaataatatt cggcctacta acacaagaaa gaagagacgt cgagaggcgc aatgttacga
241 aagtccattg agttctaagg aaaggcactt gcgtaatctt gtctacctta tctatggaga
301 aaggaggtta actcgtggaa tggtgcaaaa gttgaaagga caaaatgcag tctccttgag
361 cagagaatct ccttcgcgga atagtataat cgttataaat gacagtgata atgaaacaag
421 ggataatgaa acaagtagga aagataaaga agaagacgct tcttcactca gcattatcga
481 atgcagtcca acaatgccat catcttcgcg aaaatcaaga aagcaaaaat cgcaaaactc
541 tcttaggcaa aacaaaaaca gatcgttatt atcactatca aatttatcca ttgtagaatc
601 atcgagtaca caatctcaat gcaatggaga aaatatagca ccgtcaaaaa tagaagacga
661 tgtgatagag ttatggtctt ctctcaagaa ttcctcaagc ccaaataaac acaggaaaaa
721 tactaggtac tatcatgatg agccaaatga aaaagtaaat tttgtgatag atgtaaggcc
781 aaacctgaaa aatctagaat tactaaagac gaatacagaa cctgtacgga agaaacgaaa
841 actgtgtcac cattttgata aagttacgtt gtcatcgaac aagagtcgaa gaaagagaca
901 acatgccaat agtgcagatt caaatctctc agagtccaat gcacgatctc gtgaagaaga
961 aacaaagaca attgcatctg gcgcacgaaa tagtcgagat tcaagtcata aattaaggga
1021 gataattgtt gatggatgca atgtagcgat ggctcataca catcatcaga cgttctcact
1081 taaaggcatc gaattagtgg taaattattt taaattaagg ggtcatgatg tgaaagtctt
1141 tttacctcag tatcttcgaa aaagagaata tacgctactt gaagaatttt atagaaaggg
1201 tatagttgtc tttacaccta gtcgcaaaat tgctggcaga caaattacat ctcatgatga
1261 ctggtatatc ttggaatacg caacagcgtg cggaggaata gtgatttcct cggatcagta
1321 tagagactgg tacgaggaga agccagaatg gcgcgataca atcttgaatc gtttattaac
1381 gccaactttc gttggggatt acgtcatgtt cccagaggat ccattaggca ggtttggacc
1441 caatctggag acatttttgc gacattgaaa tacaatcttc gttataatat atattttgag
1501 ta
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