LOCUS LJ628978 1271 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68174.graph_c2_seq5.
ACCESSION LJ628978
VERSION LJ628978.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1271)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1271
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68174.graph_c2_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 462 a 220 c 259 g 330 t
ORIGIN
1 atcaatcaat tgcgttagca cgaatgactt taggcacttg cgtaatcttg tctaccttat
61 ctatggagaa aggaggttaa ctcgtggaat ggtgcaaaag ttgaaaggac aaaatgcagt
121 ctccttgagc agagaatctc cttcgcggaa tagtataatc gttataaatg acagtgataa
181 tgaaacaagg gataatgaaa caagtaggaa agataaagaa gaagacgctt cttcactcag
241 cattatcgaa tgcagtccaa caatgccatc atcttcgcga aaatcaagaa agcaaaaatc
301 gcaaaactct cttaggcaaa acaaaaacag atcgttatta tcactatcaa atttatccat
361 tgtagaatca tcgagtacac aatctcaatg caatggagaa aatatagcac cgtcaaaaat
421 agaagacgat gtgatagagt tatggtcttc tctcaagaat tcctcaagcc caaataaaca
481 caggaaaaat actaggtact atcatgatga gccaaatgaa aaagtaaatt ttgtgataga
541 tgtaaggcca aacctgaaaa atctagaatt actaaagacg aatacagaac ctgtacggaa
601 gaaacgaaaa ctgtgtcacc attttgataa agttacgttg tcatcgaaca agagtcgaag
661 aaagagacaa catgccaata gtgcagattc aaatctctca gagtccaatg cacgatctcg
721 tgaagaagaa acaaagacaa ttgcatctgg cgcacgaaat agtcgagatt caagtcataa
781 attaagggag ataattgttg atggatgcaa tgtagcgatg gctcatacac atcatcagac
841 gttctcactt aaaggcatcg aattagtggt aaattatttt aaattaaggg gtcatgatgt
901 gaaagtcttt ttacctcagt atcttcgaaa aagagaatat acgctacttg aagaatttta
961 tagaaagggt atagttgtct ttacacctag tcgcaaaatt gctggcagac aaattacatc
1021 tcatgatgac tggtatatct tggaatacgc aacagcgtgc ggaggaatag tgatttcctc
1081 ggatcagtat agagactggt acgaggagaa gccagaatgg cgcgatacaa tcttgaatcg
1141 tttattaacg ccaactttcg ttggggatta cgtcatgttc ccagaggatc cattaggcag
1201 gtttggaccc aatctggaga catttttgcg acattgaaat acaatcttcg ttataatata
1261 tattttgagt a
//