LOCUS LJ628974 1680 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68174.graph_c2_seq1.
ACCESSION LJ628974
VERSION LJ628974.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1680)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1680
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68174.graph_c2_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 597 a 269 c 338 g 476 t
ORIGIN
1 aacgcagagt acatggggac tttacctaca gagttagatg actggaagaa tggcggttta
61 cgtatgctgc gtatggacgc attcgaggag aattcagtga ggatatttgt atgttttgat
121 aaatgtttcg agtatcgaac aattatacgt gattcgtttt gcaaagttta aatttacgat
181 gaataatatt cggcctacta acacaagaaa gaagagacgt cgagaggcgc aatgttacga
241 aagtccattg agttctaagg aaagcacgaa tgactttagg cacttgcgta atcttgtcta
301 ccttatctat ggagaaagga ggttaactcg tggaatggtg caaaagttga aaggacaaaa
361 tgcagtctcc ttgagcagag aatctccttc gcggaatagt ataatcgtta taaatgacag
421 tgataatgaa acaagggata atgaaacaag taggaaagat aaagaagaag acgcttcttc
481 actcagcatt atcgaatgca gtccaacaat gccatcatct tcgcgaaaat caagaaagca
541 aaaatcgcaa aactctctta ggcaaaacaa aaacagatcg ttattatcac tatcaaattt
601 atccattgta gaatcatcga gtacacaatc tcaatgcaat ggagaaaata tagcaccgtc
661 aaaaatagaa gacgatgtga tagagttatg gtcttctctc aagaattcct caagcccaaa
721 taaacacagg aaaaatacta ggtactatca tgatgagcca aatgaaaaag taaattttgt
781 gatagatgta aggccaaacc tgaaaaatct agaattacta aagacgaata cagaacctgt
841 acggaagaaa cgaaaactgt gtcaccattt tgataaagtt acgttgtcat cgaacaagag
901 tcgaagaaag agacaacatg ccaatagtgc agattcaaat ctctcagagt ccaatgcacg
961 atctcgtgaa gaagaaacaa agacaattgc atctggcgca cgaaatagtc gagattcaag
1021 tcataaatta agggagataa ttgttgatgg atgcaatgta gcgatggcgt atgatcttat
1081 ttttcttatc catgcatttt aatgacaagt tttcctaaac ttattttgtg aataattata
1141 taagattaca aaaattatac atatgcaata tagtattata tacattttgt tttagttgtt
1201 attttaagta aattacattt ttacatttta gtcatacaca tcatcagacg ttctcactta
1261 aaggcatcga attagtggta aattatttta aattaagggg tcatgatgtg aaagtctttt
1321 tacctcagta tcttcgaaaa agagaatata cgctacttga agaattttat agaaagggta
1381 tagttgtctt tacacctagt cgcaaaattg ctggcagaca aattacatct catgatgact
1441 ggtatatctt ggaatacgca acagcgtgcg gaggaatagt gatttcctcg gatcagtata
1501 gagactggta cgaggagaag ccagaatggc gcgatacaat cttgaatcgt ttattaacgc
1561 caactttcgt tggggattac gtcatgttcc cagaggatcc attaggcagg tttggaccca
1621 atctggagac atttttgcga cattgaaata caatcttcgt tataatatat attttgagta
//