LOCUS LJ625552 3026 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67041.graph_c0_seq1.
ACCESSION LJ625552
VERSION LJ625552.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3026)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3026
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67041.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 853 a 600 c 467 g 1106 t
ORIGIN
1 tttttttttt tttttttttt caaaattcaa aagatttatt gaacaacagc gaacaagcga
61 atgagaacat aaaatattct cccatttaag atatttaaat taaaaaaatc aaataagtga
121 ttacatcgta ttatttataa caacattctt tatgataatc tatgtattgt gtactgttta
181 caaagtacat ttgttttgca caggaacact catctcactc tctcaattct atattttcat
241 ttcacactta tttactgaac gtgctgaatg aagcattcta cagtagtttg ttaacaaatc
301 attccatatt attttttggt ataaattatt ttacaataat tgttataaca gtatcttgac
361 attctgcaga tgtttcatag gctgcacgaa aaatgattat tttgcattaa agttacatta
421 tactagtgtt caactatgta cataatatgt actttatgtg aaaactgact ggccaaaact
481 tttaaaaatt ggccattact actacagata tataatatac agttattcct ttttaacaaa
541 cttaacaaaa cttactgtaa ttgtgttatt ttctgaatct cacagagaaa cggaagataa
601 tttcgtatga catttaggat gcaaaaatgc tacttataga ataatattta tagaaatacc
661 acaaaattta ttatacaatc tctaaatatg acaaagaaaa tcgttttttt ttttcatgtt
721 gaatacttta tttctaatct gttactatcg cgcagaatat cgaaatttag tttctttttt
781 caactaaaat aaatggttcc tttgcgctta tggaacagat gctaatacaa atgtatgcga
841 atgtgaattt gtttatcttc tttatagaac gcgagttatc taaataaaat taatttttct
901 cctccttctt ttcaccctca ggttcctgct gtgattgatt ttgactttct ctttctgctg
961 ccatcttttt gtacgccatt tcaaacaatt tcaagctcgc ttgttggagt tcgttcgttt
1021 gtttctttat ttcttcagga tccatatcat cttttttagc caaagtttct cgcagttttg
1081 caactaattc tttgagtttg tcgcactctt cttgtggcaa ctgcgcttta aattcttcta
1141 acttcgcttc tgtgtcgtgt ataattccct ctgcttgatt aaatgcttca actctttcct
1201 tcttaacttt atcagcctgc gcgtattgtt cagctttctt aaccatgttt tcaatttcat
1261 ctttgctaag gccaccacta gattgaataa caatttgttg ttctttgcca gttcccttat
1321 ccttggctga cacgtgcact attccgtttg catcgatatc aaacgttact tctatttgcg
1381 gcacacctct tggtgcaggc ggaataccaa caagagtaaa ctgtcctagg agtttgttat
1441 cagaagccat ttctcgttcg ccttgatgaa ctttaatctc gacttgcgtt tgaccatccg
1501 ctgccgtaga aaatacttgg ctttttttcg tgggtattgt tgtattacga gaaattaatc
1561 ttgtgaacac gccgccaagt gtttcaatac ctaatgacag aggtgtgaca tcaagaagca
1621 aaacatctgt cacatctcct gcaagtacac ctccttgaac tgcagcgccg acagctacag
1681 cttcatcagg atttacagct tttgatggtt gtcggccaaa tatttcttga accgtttgtt
1741 gtactttagg taccctcgtc ataccaccaa caattaaaac ttctccaata tccgatttcg
1801 taacttcggc atcagaaagt gctttttgac aaggttgaat agtacgctta attaaatcag
1861 tcacgagact ttcgaattta ctcctcgata acttaagatt taaatgcttt ggtccactag
1921 agtccatagt aagataggga aggtttatat ccgtttgaag ggagcttgat aactctattt
1981 tagccttttc cgaagcttct ttcaatcttt gcattgccat tgcatcttta gttacgtcta
2041 taccttgctc ttttttgaat tccgatacaa ggtaattaac taatgcattg tcaaaatctt
2101 ctccgcctaa aaatgtatct ccatttgtgg attttacttc gaagacacct ttctgaattt
2161 ctaaaatcga gatatcaaaa gtacctccac ctaaatcata aacagcaatg attttatctt
2221 cctgtttgtc catgccatat gcaagtgcag ctgcggttgg ctcgttaatt acacgaagga
2281 catttaatcc agcgatttgc ccagcatcct ttgttgcttg tcgttgtgaa tcattaaaat
2341 acgctggcac agtaataaca gcatttttta cagacgtgtt taaataagct gctgcggttt
2401 ccttcatttt ccctagtaca aatgctccaa tttggcttgg agaatacatt tttccatcag
2461 caccttgaac ccatgcatct ccattagatg cttttacaat tttgtatgtt acactcttca
2521 tatctttttt cacttcaggg tcatcaaatt ttcgtccaat taaccgtttt gttgcataaa
2581 atgtatttga agaatttgtg actgcttgac gttttgcagg catgccaact aaacgttcat
2641 catcttttgt aaatgcaaca taggatggag ttgttctcga gccttcagta ttttctataa
2701 ccttagcttg cttgccctcc atcactgcta cgcaggaaaa agtagttcca agatctatac
2761 caataattgg actttttaca cgtttagatt tatgccgata ctgttgcata tcgataaaac
2821 ggtgtaggca agtcatcgga gcggcaacat ttttccaaat tgtaaaatgt gcggtacagt
2881 tgcgactcaa tgatctcgtc agcatttttg attttcttga aattttaaca gaaaatgaaa
2941 cgtggtgcgc ccggcttcac tatcagatat aagtaacaca tgtacataca actcgtctgt
3001 gcaatctgcc gttgatacca ctgctt
//