LOCUS LJ625468 1050 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66350.graph_c0_seq1.
ACCESSION LJ625468
VERSION LJ625468.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1050)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1050
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66350.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 371 a 162 c 165 g 352 t
ORIGIN
1 ggaaagcagt ggtatcaatg caagtacaat tttaacgatg tctatatcgt cgaaaaatga
61 cgtgtatccg acgaaacatt ccgatcgtag tggtggttcg gattgtaaag aaaagcataa
121 gtcacgcaaa gaattaaagt acagaaaatc cgaaagtgta aaaaagtcga gaccaaagaa
181 aaaaaggcga cgtcttcaat cttcttccac ttcgggataa tatcatatgc gatttatgtt
241 agctaatatc ggaaagtata tataaatttt catttgagtt aatgacattt taatttttta
301 taagatgcga taaataatat gtaatgaaat ataatttcat attattgttt tggcctccat
361 attggtctcc attatgacgc catggtcatt tcatgactgt ctctcataca tttgtaatat
421 acaatatttt taatatttta aaaaataagc ttaattaaga ttattttttc ttacaaatta
481 aatgttttat atatcttgtc attttattac atctgtatac tagtagcaca taaatatttt
541 catctttatt aataaaaaga aagtaacttc gtattcgtca taagaaaata tgtatatatt
601 aaaataaatt tgcatttgca cgtttcaaaa aaattgttgc tgtaataatg cagaacgaaa
661 gatatagcat acagggtgtc ccaaacatgg agtatgagtc gtattggaga catggaagct
721 gtcaagaaaa acaataaagt tttatatcat tttataatat tcgccataat tatcgactta
781 aacaataaaa tgtttgaacc aatgtacgcc tcgcttgatg acattggtgc gcgatgaaag
841 gaatgtaatg cggcgcgata ttacaaattc gcgaatcgta gcatcaccgt acattggttc
901 agatgtttta ttctttaagt cgataactat agtacaaaat gatattaaga tttttgttga
961 cttcctcttg acttcttcta cgtcctcgat gcgactcata tcccatttct gagataccct
1021 gtacacacat atatatacac acacacacac
//