LOCUS LJ625243 1548 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66785.graph_c0_seq10.
ACCESSION LJ625243
VERSION LJ625243.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1548)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1548
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66785.graph_c0_seq10"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 541 a 237 c 277 g 493 t
ORIGIN
1 tggtatcaac gcagagaacg gaccccaaac gagaaactaa agctagaaag caagcatttc
61 cagttaagca agaaatcaaa acagatggta ataatataac cacagcgggt gaaacatata
121 agaccgagaa cgatcatgtg gctgacaact cccttaaaat agaagagaac gcggtggatg
181 ttgaaacgtg tagatatact atggaagacg catcggagca tactgatatg caaatgaatc
241 aaacggtgta gcaagtttta atgaagacat gccatttatc acgaagacag tgaaactatt
301 ccgatagttg tatatattct tattagtgtc tacagttccg tttgcgtgct gcatctgctt
361 tttacaacta gcctatatat atatttacgc atatgcatat tagatattgc gacgagagat
421 tcaacataga gagattaaat ctctcgacaa gcaacgtgtt ccagatttct cgtgcataat
481 acgatacttt ttccactata gattattaat aaggttttcg ataaaagaga tcttcctaga
541 agacatttcg ccagtaagaa cttccataag ctttttttaa ttgagaatag ttgaatttga
601 agtagttgct tgatcgtaat aataagaata atacagatat gagagctgcc tagagtacat
661 atataattta tgcccataaa tggttgaaaa tgatgtctca gatttttata ttatctatta
721 aagaattaga gatctttata cataattttc ctctatcttc caatcctttc gtgaatatct
781 gtcattaatt ctgcaatatt aagcaaaaga tatgtgtagc ctgcaaagaa tatgtatgaa
841 agaagtatat atttcctttc attgggatca ttttgaatgt cttaagtaag ttaaaatgta
901 gaccattaag aaaggggcaa aatagttaaa aaaaaaatta tctttttaat atggcgttac
961 aagcatttgg gtcataaaga aaacgtaact tcaacatcgt ttctactggc gacatttcct
1021 gtgtaacttt cctgaataat tgctttcgta aatagattat tctgggtccc attgatcgtc
1081 ctcaatgttc aggtatgttc gccttacgaa aattgacagc gcacatgatt ggggaccgat
1141 ttgcgcgtca tattataata caaagcacat gtttgtataa gtaagctaat agcactattt
1201 gctacaagct gatgttagat tgtccgataa attcagatgt tgaattttta acagagtgcg
1261 cctttttcca tatagtgttg aagggaatgt tgaaagtaaa agttttaaca atatcttgca
1321 gttagttacg ctaaacggtt tttcgcgcgt agattatata agctgccact tgtagagtgc
1381 attctgatag aatgcaatat agcgaatcat gtaatattta tatgtacata gtgatgtttg
1441 cgcttcattc atcgtaatac atgactttat ttaagtaatc attattattc gccagatata
1501 atattcgaaa taaaaaatat atctataaaa aggaaaaaaa aaaaaaaa
//