LOCUS LJ625240 1682 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66785.graph_c0_seq7.
ACCESSION LJ625240
VERSION LJ625240.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1682)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1682
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66785.graph_c0_seq7"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 512 a 328 c 408 g 434 t
ORIGIN
1 gattcgtagc gtataaacat aacagcacgc ggtcattagc tctcgattca tattgtttac
61 gtattcgtct ggcacatggg agggcggctg gagcgcggct gaaatcgcgt cggacccgct
121 tcgtgaacga cgacgggcac gtatcgccgt tcgtggcgtt ccctcgaggc gtcgtgatta
181 gagatatcgg gacgggactt accacgggct ttacggacgc gcaaaaatgt catcgagcta
241 cgcagacggg ttatcgccgt acgaaaacaa aggagtgctg ggactggagg agagatacga
301 taccgtcgag actcttcgcc tgaaatgtgg tctcctggcc gagtggatac aaggcgcgcg
361 tcacgtcgtg gtccacactg gcgccggtat cagcaccgcg gctggtattc ccgattttcg
421 gggtacaaat ggcgtatgga cattggaaca gaagggtttg aaaccttcta tgaacatctc
481 ttttgatgaa gcaattccta caaagacaca tatggcattg aaaaaactga tagaggccaa
541 aaaaataaag ttcatcataa gtcagaatat agatggacta catctacgat caggagtaca
601 gaggcagtat cttgctgaac tgcatggaaa tatgtttaca gagcagtgtg acaaatgtgg
661 aagatcgttt attcgtaatt ttgcaaccaa aagcgtgggg aaaaaatcct tggatactgt
721 atgcagatca gaacagatag gcggtcgtcc atgccgtggt cgaatgcatg ataccattct
781 cgactgggaa cataatttgc cagacagtga tttgacacta tctgatcttc actccagcgt
841 cgccgatctg agtatatgtc tgggaacgac gttacaaatt attccaagtg gtaatttgcc
901 tttatacacg aagaaatatg gaggccgtct tgttatatgt aatttgcaac cgacgaaaca
961 cgataagaaa gctgacttga tcattaatgg caacgtcgac gagataatgg tcgcggtcat
1021 gaagaaattg ggattggaaa ttccggaata tgaaagcgct atggatccga cacgaaattc
1081 cgatacaacg gctaaagaga tggactggac aatcccgacc agcagagtaa aggaaatgaa
1141 cgtgctgtac aagaaggtgt gcaagccaat gcgaagaaaa cggaaaacgt ttatgtacga
1201 aagggagaga acggacccca aacgagaaac taaagctaga aagcaagcat ttccagttaa
1261 gcaagaaatc aaaacagatg gtaataatat aaccacagcg ggtgaaacat ataagaccga
1321 gaacgatcat gtggctgaca actcccttaa aatagaagag aacgcggtgg atgttgaaac
1381 gtgtagatat actatggaag acgcatcgga gcatactgat atgcaaatga atcaaacggt
1441 gtagcaagtt ttaatgaagt aataatttcc cattctaata tttcgattat tctcagtgta
1501 cgctacagtt acttatgagt gcataattga atgatgttca ttgttcgtac gaaatatgcg
1561 atagatttgc tgatgttcaa taggcatttt aaacatttgc tgcacattta gtattaaatg
1621 tagctctttt tccttttatc ttcctctttc cttcctcttc cgtttttttt tttttttttt
1681 tt
//