LOCUS LJ625235 2742 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66785.graph_c0_seq2.
ACCESSION LJ625235
VERSION LJ625235.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2742)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2742
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66785.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 897 a 481 c 595 g 769 t
ORIGIN
1 gattcgtagc gtataaacat aacagcacgc ggtcattagc tctcgattca tattgtttac
61 gtattcgtct ggcacatggg agggcggctg gagcgcggct gaaatcgcgt cggacccgct
121 tcgtgaacga cgacgggcac gtatcgccgt tcgtggcgtt ccctcgaggc gtcgtgatta
181 gagatatcgg gacgggactt accacgggct ttacggacgc gcaaaaatgt catcgagcta
241 cgcagacggg ttatcgccgt acgaaaacaa aggagtgctg ggactggagg agagatacga
301 taccgtcgag actcttcgcc tgaaatgtgg tctcctggcc gagtggatac aaggcgcgcg
361 tcacgtcgtg gtccacactg gcgccggtat cagcaccgcg gctggtattc ccgattttcg
421 gggtacaaat ggcgtatgga cattggaaca gaagggtttg aaaccttcta tgaacatctc
481 ttttgatgaa gcaattccta caaagacaca tatggcattg aaaaaaactg atagaggcca
541 aaaaaataaa gttcatcata agtcagaata tagatggact acatctacga tcaggagtac
601 agaggcagta tcttgctgaa ctgcatggaa atatgtttac agagcagtgt gacaaatgtg
661 gaagatcgtt tattcgtaat tttgcaacca aaagcgtggg gaaaaaatcc ttggatactg
721 tatgcagatc agaacagata ggcggtcgtc catgccgtgg tcgaatgcat gataccattc
781 tcgactggga acataatttg ccagacagtg atttgacact atctgatctt cactccagcg
841 tcgccgatct gagtatatgt ctgggaacga cgttacaaat tattccaagt ggtaatttgc
901 ctttatacac gaagaaatat ggaggccgtc ttgttatatg taatttgcaa ccgacgaaac
961 acgataagaa agctgacttg atcattaatg gcaacgtcga cgagataatg gtcgcggtca
1021 tgaagaaatt gggattggaa attccggaat atgaaagcgc tatggatccg acacgaaatt
1081 ccgatacaac ggctaaagag atggactgga caatcccgac cagcagagta aaggaaatga
1141 acgtgctgta caagaaggtg tgcaagccaa tgcgaagaaa acggaaaacg tttatgtacg
1201 aaagggagag aacggacccc aaacgagaaa ctaaagctag aaagcaagca tttccagtta
1261 agcaagaaat caaaacagat ggtaataata taaccacagc gggtgaaaca tataagaccg
1321 agaacgatca tgtggctgac aactccctta aaatagaaga gaacgcggtg gatgttgaaa
1381 cgtgtagata tactatggaa gacgcatcgg agcatactga tatgcaaatg aatcaaacgg
1441 tgtagcaagt tttaatgaag acatgccatt tatcacgaag acagtgaaac tattccgata
1501 gttgtatata ttcttattag tgtctacagt tccgtttgcg tgctgcatct gctttttaca
1561 actagcctat atatatattt acgcatatgc atattagata ttgcgacgag agattcaaca
1621 tagagagatt aaatctctcg acaagcaacg tgttccagat ttctcgtgca taatacgata
1681 ctttttccac tatagattat taataaggtt ttcgataaaa gagatcttcc tagaagacat
1741 ttcgccagta agaacttcca taagcttttt ttaattgaga atagttgaat ttgaagtagt
1801 tgcttgatcg taataataag aataatacag atatgagagc tgcctagagt acatatataa
1861 tttatgccca taaatggttg aaaatgatgt ctcagatttt tatattatct attaaagaat
1921 tagagatctt tatacataat tttcctctat cttccaatcc tttcgtgaat atctgtcatt
1981 aattctgcaa tattaagcaa aagatatgtg tagcctgcaa agaatatgta tgaaagaagt
2041 atatatttcc tttcattggg atcattttga atgtcttaag taagttaaaa tgtagaccat
2101 taagaaaggg gcaaaatagt taaaaaaaaa attatctttt taatatggcg ttacaagcat
2161 ttgggtcata aagaaaacgt aacttcaaca tcgtttctac tggcgacatt tcctgtgtaa
2221 ctttcctgaa taattgcttt cgtaaataga ttattctggg tcccattgat cgtcctcaat
2281 gttcaggtat gttcgcctta cgaaaattga cagcgcacat gattggggac cgatttgcgc
2341 gtcatattat aatacaaagc acatgtttgt ataagtaagc taatagcact atttgctaca
2401 agctgatgtt agattgtccg ataaattcag atgttgaatt tttaacagag tgcgcctttt
2461 tccatatagt gttgaaggga atgttgaaag taaaagtttt aacaatatct tgcagttagt
2521 tacgctaaac ggtttttcgc gcgtagatta tataagctgc cacttgtaga gtgcattctg
2581 atagaatgca atatagcgaa tcatgtaata tttatatgta catagtgatg tttgcgcttc
2641 attcatcgta atacatgact ttatttaagt aatcattatt attcgccaga tataatattc
2701 gaaataaaaa atatatctat aaaaaggaaa aaaaaaaaaa aa
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