LOCUS LJ622212 2033 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66646.graph_c0_seq2.
ACCESSION LJ622212
VERSION LJ622212.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2033)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2033
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66646.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 651 a 381 c 449 g 552 t
ORIGIN
1 cagtggtatc aacgcagagt tcaagcacag gcctagcttc aatcgatgcg gcatcagcgt
61 ctcattgaat gaacatgtcg caagaatcga gtgatgcatc cacatcacag gcgtacaaag
121 tgttgcacaa tgatcaggtt ggcagataca tggtcacgag cagagaatta caagctggtg
181 aagaacttgt cacagaaatg ccctttgttg tcgggccgaa ggcatgcact tatcccttgt
241 gtctttcctg ctacacacct tggccccctg aaccggatga caaacagcta tgttccacat
301 gcggatggcc cgtttgcggg caagaatgcg agaatgctct acaacataaa gattacgaat
361 gccaggtgtt tgcacaggcg aacgagaagt ttaacataga cgccgcattg cagaacaacg
421 aaaacggcgt tccgcaatta gaatgcataa caccgttgag actattattg gagtcggaga
481 gaaatgttga aagatggaat aaggaaataa aagatatgga accgcataat aagatacggt
541 gtcagaaagc acaatggaag tcagatcatg tcaatatcgt ggattatctg agaaaacgac
601 ttaaacttga tagattctcg gaggaacaca tacaaacagt gtgcggtatc ttggagatta
661 atacgtttga agtacggaca gcgaaagggt tcagcgcacg tggtctctat ccaacagttg
721 ctatgatgaa tcactcatgc gtctcaaata cgtctcacag catatcgcca attgattaca
781 ggatacggct gcgtaccacg cttaagattc ctgcgggcgg tgaactttac gcaagttaca
841 cgcactcgtt acttccaacg atgctacgga gagagcatct tcttgagggc aagcacttcg
901 cgtgcgcgtg tccacgttgt tcggatccta cggagctggg cacccatatg tcctcgctga
961 aatgtaacaa atgcgacaac ggaattgtct tatcactgga ttctttagat tcggaaagta
1021 aatggaagtg tacgcattgc gatttttcta ctaccggtca agcagtgcga aaagttttcc
1081 ggatcattca agcggaagta gacgccgctg aagctatcag cggagccgat ggagccgatg
1141 cgattcacga aagagagacc attatgaaaa agtatcgatc agttttacat ccccagcatg
1201 ccttcctttc gatgttacgg cattcattga cccaaatgta cggtcgagtt gacgagtatt
1261 tgttggacga tttgccggat gttgtattgg agcataaagt cgacttgtgt cgttcactgc
1321 ttcaagtatt gaacgttgtg gaacctgggt acagtcgtgt aagaggcatg acgttatacg
1381 agttacacgc accgttacta ttcttggcga aaggtcagtg gaatgccggt gtcattgacg
1441 agaccggact aaagtccaaa atgatagaag ctgcgaatat tctaaaagag gcggttatga
1501 tattaagttt ggaaccaccg gatacgtctg aaggacaaat aggactcgtt gcaaaggaat
1561 ctatggttca actggaacaa tcaataaatg atttataagt gtctattgta aaatctcgtt
1621 atatttatac tttgttaata aatatttctt gaaatttctc gttactgaca agtgtcatct
1681 gattatattt tgtaattatt tgttaataaa aaaagataat ttcttaaagg agctagaaga
1741 gaaaattgta taaaacatgt ttaaatgctt ctgattttca cagtaagcta cgataataac
1801 tgctgacaaa gaaatataca atagaaatca gaagagtaaa ctaacaataa gaaatattgt
1861 tttgaatatc ccaaatactt taacagcaca tgatactgtc atgtgcagtt agaatatata
1921 taatcttaat ttctttaaaa tattagatac gcaatacatt ttaatgaaat ttgatgtatt
1981 attattaaaa tattcttcta taaagtagaa aaaatatctc aataaacgaa tta
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