LOCUS LJ621596 2156 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66208.graph_c0_seq6.
ACCESSION LJ621596
VERSION LJ621596.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2156)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2156
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66208.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 862 a 352 c 468 g 474 t
ORIGIN
1 ggagttatcg attctcttta gaggtgtcgc aagtcgcaac tgtcgcaagt cgcgagactc
61 gcaaggtgtc gacagtacag tgttgtgctt gtactttatt gttgttataa atttattatt
121 aataaaaaaa taatctttat ttcaccgtaa gttggaacga cacgcgtata ttgtgcgttt
181 taattattta tagtttagaa tcttacgatg gagaataaga taattaatca aaaggaatat
241 ttgaaaaaat acatatcttt gggcgatggt gacgagaaaa agaagaaaaa gaaaaagaag
301 cacaaaacgg gatcgaaaac agtaacaatt atagatgatg atatagactt gaagaatatg
361 agaccaattg aagaaagtga atttaatatc cttttagaag acgaagatgc tcctcaaatt
421 gctggtataa ttgacgaacg tagatcagtc gatttcacag ataagaaaag atggaaaatt
481 ataaccgaga acaacgaagg cgatttaact attattgatc gcattgtcga taaagaaaga
541 agtaatttta acgagataac cgagcaaatc aatgataatc tcgatttaag tccaccaaga
601 attaggcatt ccaaaaataa acgtatggat ttaagtcctc atggacagtc taaagatgat
661 agttcagatc cgagtccacc tagatctaaa cagtctaaaa ataaacgtgc gagtccagat
721 gaacgatcaa aagatgatag ctctgagctg agtccaccta gacgtaagca ttcgaaatat
781 aaagatatcg actcaaattc gcgcagacga gcaaaaagcg acgattcaga tttgagtcca
841 cctagaaaat ttaaaaacta tgattcagat ctgagtccac cccgaaagtc cagaaataat
901 gacgattctg acttgagtcc gcctagaaaa tccaaaaatt atgattcaga tttaagtcca
961 cctagaaata cgaaacatcg gacttcgact cgcgatacat ctggacgaag ccaccggagt
1021 tcaggtaaca gagacagtga ttcggatttt agttcatcta gaaaacacaa gcagaatcta
1081 gatacagatt tgtatgaaag tagaaaaaat aaaacaaaca gagattcaaa ttcaagcaca
1141 tcacgacgta aggaacaccg atctcgaaaa gaggatccgt catattccaa ttcgcgtaga
1201 accgacagag gacacgatta ttatgataaa aattcatcca gatctagcag acaagatgga
1261 tcaaggtcaa gcagagttaa gcggaaggaa tatgaagatc gagatcgtaa atctcgatca
1321 tactcggata caggagagaa aagaaaaaaa tcacgatggg gcgaagaaac agacaatttt
1381 gaacacggac acgcggaaaa ccatccgaaa gatcgtgacg accggatgac aaagacatta
1441 gatgggaaaa aagcgggatt tcaagctgcg aaagcattgc gagacgaaat tgaggcccat
1501 aaacgacgag acgcagagct gtttagtaag ttaagtaacg aagtcagcgg aaaaggacaa
1561 gctacaatcg tgcgtgacaa gaaaacagga agaaagcgta atttggaaga agaagcagaa
1621 aaaaaccgcg aacaacaaag aaagcaacaa gagatggatg agaagtacgc caaatggggc
1681 aaaggtttga aacaagtgga ggatcgcgag gaaaaattaa aggacgactt atacgagata
1741 aataaacctt tagcaagata tgcggatgat gcagatttag ataaacaatt gagggaacaa
1801 gacagagaag gtgatcccat gttgaaatac ataaaacaga agcagataaa agagggaaaa
1861 agaaagccag atccgataca atatcaaggc tcgtacgcgc caaatcgatt cggtattaag
1921 cccggtcatc gatgggacgg ggtcgatagg agcaatggat acgagaagca atggttcgaa
1981 gcacaaaatg caaaagtagc gttacaagaa gatgcctata aatggagtac agccgacatg
2041 tgatcatgtt cacacatatt attataacag aggttttcga ttctatttcc atcgatcgtt
2101 aataacaaag aatcaataaa gattttaaat gtttcgataa aaaaaaaaaa aaaaaa
//