LOCUS LJ621595 2169 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66208.graph_c0_seq5.
ACCESSION LJ621595
VERSION LJ621595.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2169)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2169
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66208.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 877 a 344 c 461 g 487 t
ORIGIN
1 gggtagtagt atagacatct gtgaatggta cacatggata cacatttatg tgtggtatag
61 tttattgtta tttattttat tatcgataaa agcattaaaa tagcttttaa aaatctcggc
121 gtgaatctaa atctaatata gtcatctaaa tctcatactg cgcgtccaaa cttcaaattg
181 cttgtaatct agagctctgg cgatggaaaa caaagtaatt aatcaaaagg aatatttgaa
241 gaaatacata tctttcggcg atacagatca aaaaaagaag aaaaagaaga agaagcctaa
301 aacgggaacg caaacagtaa aaattataga tgatgacata gacctgaaga atatgcggcc
361 cattgaagag ggtgaattcg atatcctttt agagggagaa gacgctccgc aaattgctgg
421 tataattgac gaacgtggac cagttgattt cacggacaaa agaagatgga aaattataac
481 tgagaatgaa gaaggagatt taactattat taatcgtact accagtaagg aaaaaggatt
541 tcaagtggat gagatggata ccaatcagaa taacagtgat gattccgatt tgagcccacc
601 tggatctaaa aattctaaga atgcagattt aaattcacat ggacagtcta aaaatgatag
661 ctcaaattcg agtccaccta gatctaggca ttctaagaat aagcatgcag atttaagtcc
721 acatagaaaa tctaaagata tatctaaaga taatgactca gatttgagtc cacctagatc
781 taagcattct aaaaataagc atgtggattt aaatccacgt aaaaaatttg aaagtgaatc
841 taaagacgat gattcagatt tgagtccacc taggcagtct aagaataatg actctgactt
901 gagttcacct agacaatcta ggaataacga caataactca gatttgagtc cacccagaca
961 atttagaaat tacgattcgg atctagatcc acctagaaaa attatgaaac attcgactcg
1021 cagtacatct gaacgaaact atcggagttc aggtaacaga gacagtgatt cggattttag
1081 ttcatctaga aaacacaagc agaatctaga tacagatttg tatgaaagta gaaaaaataa
1141 aacaaacaga gattcaaatt caagcacatc acgacgtaag gaacaccgat ctcgaaaaga
1201 ggatccgtca tattccaatt cgcgtagaac cgacagagga cacgattatt atgataaaaa
1261 ttcatccaga tctagcagac aagatggatc aaggtcaagc agagttaagc ggaaggaata
1321 tgaagatcga gatcgtaaat ctcgatcata ctcggataca ggagagaaaa gaaaaaaatc
1381 acgatggggc gaagaaacag acaattttga acacggacac gcggaaaacc atccgaaaga
1441 tcgtgacgac cggatgacaa agacattaga tgggaaaaaa gcgggatttc aagctgcgaa
1501 agcattgcga gacgaaattg aggcccataa acgacgagac gcagagctgt ttagtaagtt
1561 aagtaacgaa gtcagcggaa aaggacaagc tacaatcgtg cgtgacaaga aaacaggaag
1621 aaagcgtaat ttggaagaag aagcagaaaa aaaccgcgaa caacaaagaa agcaacaaga
1681 gatggatgag aagtacgcca aatggggcaa aggtttgaaa caagtggagg atcgcgagga
1741 aaaattaaag gacgacttat acgagataaa taaaccttta gcaagatatg cggatgatgc
1801 agatttagat aaacaattga gggaacaaga cagagaaggt gatcccatgt tgaaatacat
1861 aaaacagaag cagataaaag agggaaaaag aaagccagat ccgatacaat atcaaggctc
1921 gtacgcgcca aatcgattcg gtattaaacc tggtcatcga tgggacggtg tcgatagaag
1981 taacggatac gaaaagaagt ggttcgaagc acaaaatgca aagacagcgc ggcaagaaga
2041 agcctacaga tggagtacat ctgatatgtg attacgtttg cacataacta ttatatatta
2101 ctacaacagg aattttctat ttccattaat tgttaataaa gaaagtaatt tttaaaaaaa
2161 aaaaaaaaa
//