LOCUS LJ621594 2136 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66208.graph_c0_seq4.
ACCESSION LJ621594
VERSION LJ621594.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2136)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2136
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66208.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 845 a 356 c 474 g 461 t
ORIGIN
1 gggtagtagt atagacatct gtgaatggta cacatggata cacatttatg tgtggtatag
61 tttattgtta tttattttat tatcgataaa agcattaaaa tagcttttaa aaatctcggc
121 gtgaatctaa atctaatata gtcatctaaa tctcatactg cgcgtccaaa cttcaaattg
181 cttgtaatct agagctctgg cgatggaaaa caaagtaatt aatcaaaagg aatatttgaa
241 gaaatacata tctttcggcg atacagatca aaaaaagaag aaaaagaaga agaagcctaa
301 aacgggaacg caaacagtaa aaattataga tgatgacata gacctgaaga atatgcggcc
361 cattgaagag ggtgaattcg atatcctttt agagggagaa gacgctccgc aaattgctgg
421 tataattgac gaacgtagat cagtcgattt cacagataag aaaagatgga aaattataac
481 cgagaacaac gaaggcgatt taactattat tgatcgcatt gtcgataaag aaagaagtaa
541 ttttaacgag ataaccgagc aaatcaatga taatctcgat ttaagtccac caagaattag
601 gcattccaaa aataaacgta tggatttaag tcctcatgga cagtctaaag atgatagttc
661 agatccgagt ccacctagat ctaaacagtc taaaaataaa cgtgcgagtc cagatgaacg
721 atcaaaagat gatagctctg agctgagtcc acctagacgt aagcattcga aatataaaga
781 tatcgactca aattcgcgca gacgagcaaa aagcgacgat tcagatttga gtccacctag
841 aaaatttaaa aactatgatt cagatctgag tccaccccga aagtccagaa ataatgacga
901 ttctgacttg agtccgccta gaaaatccaa aaattatgat tcagatttaa gtccacctag
961 aaatacgaaa catcggactt cgactcgcga tacatctgga cgaagccacc ggagttcagg
1021 taacagagac agtgactcgg atcttagtcc acctagaaaa aatcgtaaga atctagatac
1081 agatttatat gaaagcagaa agaatacaaa gagcagagat tcggatttaa atacatctcg
1141 gcgtgacgaa catcgatccc gaagagatca ttcgccacat tccacttcgc ggagagacaa
1201 aaggcacgat tatcacgata aaaaaagttc atttagatcc aatagacaag atgcgtcaag
1261 gtcaagcagg gatgaacgag agaagaaata tgaagataga gatcgtaaat ctcgatcgta
1321 ctcagataca cgggagagaa gaaaaaagac gcgttgggac gaggaaacag acgattccga
1381 gcgtgggcgt atgggaaatc gttcaaagga tcatgacaat cgagcgacaa agacattaga
1441 cggaaaaacg gcaggattcc aagctgcgaa agcattgcga gaagaaactg aagcccataa
1501 acggcaagag gcggagcact ttagcaagtt aagtaaagag attaccggag aaggacaagc
1561 tacgattatg cgtgacaaaa tgggaagaaa gcgaaatttg gaagcagaaa cagcagaaaa
1621 acgggaagag gaaatgaagc aacgagagat cgaggaaaag tatgcaaaat ggggcaaagg
1681 cttgaagcaa gtggagaatc acgaggcaaa attaaaaagt gacttatatg agatgaataa
1741 gcctttggcg agatacgcag atgacgcaga tctagataaa gaattgagag aacaagatag
1801 ggagggcgat cctatgttag agtacataaa acaaaaacaa ataaaagaag ggaaacgaaa
1861 gccagatccg ccgcaatatc aaggttcata cgcgccaaat cgattcggta ttaaacctgg
1921 tcatcgatgg gacggtgtcg atagaagtaa cggatacgaa aagaagtggt tcgaagcaca
1981 aaatgcaaag acagcgcggc aagaagaagc ctacagatgg agtacatctg atatgtgatt
2041 acgtttgcac ataactatta tatattacta caacaggaat tttctatttc cattaattgt
2101 taataaagaa agtaattttt aaaaaaaaaa aaaaaa
//