LOCUS LJ621592 2141 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66208.graph_c0_seq2.
ACCESSION LJ621592
VERSION LJ621592.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2141)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2141
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66208.graph_c0_seq2"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 843 a 349 c 478 g 471 t
ORIGIN
1 ggagttatcg attctcttta gaggtgtcgc aagtcgcaac tgtcgcaagt cgcgagactc
61 gcaaggtgtc gacagtacag tgttgtgctt gtactttatt gttgttataa atttattatt
121 aataaaaaaa taatctttat ttcaccgtaa gttggaacga cacgcgtata ttgtgcgttt
181 taattattta tagtttagaa tcttacgatg gagaataaga taattaatca aaaggaatat
241 ttgaaaaaat acatatcttt gggcgatggt gacgagaaaa agaagaaaaa gaaaaagaag
301 cacaaaacgg gatcgaaaac agtaacaatt atagatgatg atatagactt gaagaatatg
361 agaccaattg aagaaagtga atttaatatc cttttagaag acgaagatgc tcctcaaatt
421 gctggtataa ttgacgaacg tagatcagtc gatttcacag ataagaaaag atggaaaatt
481 ataaccgaga acaacgaagg cgatttaact attattgatc gcattgtcga taaagaaaga
541 agtaatttta acgagataac cgagcaaatc aatgataatc tcgatttaag tccaccaaga
601 attaggcatt ccaaaaataa acgtatggat ttaagtcctc atggacagtc taaagatgat
661 agttcagatc cgagtccacc tagatctaaa cagtctaaaa ataaacgtgc gagtccagat
721 gaacgatcaa aagatgatag ctctgagctg agtccaccta gacgtaagca ttcgaaatat
781 aaagatatcg actcaaattc gcgcagacga gcaaaaagcg acgattcaga tttgagtcca
841 cctagaaaat ttaaaaacta tgattcagat ctgagtccac cccgaaagtc cagaaataat
901 gacgattctg acttgagtcc gcctagaaaa tccaaaaatt atgattcaga tttaagtcca
961 cctagaaata cgaaacatcg gacttcgact cgcgatacat ctggacgaag ccaccggagt
1021 tcaggtaaca gagacagtga ctcggatctt agtccaccta gaaaaaatcg taagaatcta
1081 gatacagatt tatatgaaag cagaaagaat acaaagagca gagattcgga tttaaataca
1141 tctcggcgtg acgaacatcg atcccgaaga gatcattcgc cacattccac ttcgcggaga
1201 gacaaaaggc acgattatca cgataaaaaa agttcattta gatccaatag acaagatgcg
1261 tcaaggtcaa gcagggatga acgagagaag aaatatgaag atagagatcg taaatctcga
1321 tcgtactcag atacacggga gagaagaaaa aagacgcgtt gggacgagga aacagacgat
1381 tccgagcgtg ggcgtatggg aaatcgttca aaggatcatg acaatcgagc gacaaagaca
1441 ttagacggaa aaacggcagg attccaagct gcgaaagcat tgcgagaaga aactgaagcc
1501 cataaacggc aagaggcgga gcactttagc aagttaagta aagagattac cggagaagga
1561 caagctacga ttatgcgtga caaaatggga agaaagcgaa atttggaagc agaaacagca
1621 gaaaaacggg aagaggaaat gaagcaacga gagatcgagg aaaagtatgc aaaatggggc
1681 aaaggcttga agcaagtgga gaatcacgag gcaaaattaa aaagtgactt atatgagatg
1741 aataagcctt tggcgagata cgcagatgac gcagatctag ataaagaatt gagagaacaa
1801 gatagggagg gcgatcctat gttagagtac ataaaacaaa aacaaataaa agaagggaaa
1861 cgaaagccag atccgccgca atatcaaggt tcatacgcgc caaatcgatt cggtattaaa
1921 cctggtcatc gatgggacgg tgtcgataga agtaacggat acgaaaagaa gtggttcgaa
1981 gcacaaaatg caaagacagc gcggcaagaa gaagcctaca gatggagtac atctgatatg
2041 tgattacgtt tgcacataac tattatatat tactacaaca ggaattttct atttccatta
2101 attgttaata aagaaagtaa tttttaaaaa aaaaaaaaaa a
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