LOCUS LJ621089 2390 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67091.graph_c0_seq4.
ACCESSION LJ621089
VERSION LJ621089.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 2390)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2390
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67091.graph_c0_seq4"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 591 a 482 c 447 g 870 t
ORIGIN
1 cttggatgtc cgtcttcacc tctctaccta tatgggccat cgctattacg cagtgcggtc
61 agtcttgggc cttctacact ctcctgaccg agctgccgac gtatatggat aaaattttgc
121 atctcaatgt acaacaaaat gcgttccttt cggcgttacc ttacctaagc gcttggctag
181 tgggtctttg tatctcgagc ttcgcagacg cgctcctcgc tcgtcgtttg atctcacctc
241 tggcttcttt taaactatgg aacactgtag cctctttagg gcccagtctc agttttgtcg
301 gtgctatctg ggctggatgc gatcgtatga cggtgatgct gatgcttgcc ggattcggtt
361 ctcttcaggg cgccgtatat gccggaaatc agatgaatca catcgcattg gcaccacgtt
421 acgcgggcac tttatacgga ttgacgaatg ctgcggcgaa cgcttgtggt ttcttggcac
481 cgtatgttat tggcagtata gtggagggac acgaaactct cgcacgatgg cacatagttt
541 tctggatggc agcgggaata aatatggcta ctaattgctt ctacttgatg tttgcgtccg
601 ccactgaaca accatggagc aaaggcggta gttgatgaca atgtcgcatt agaaatgcga
661 tattaaacgt ggaaaataat atacttttca atcatgttgc acatagcaca ttttaatttg
721 gctagctagt tttattataa ttcaataatt gattacttca ttattaatca ttattttgga
781 aaataatttg ttaaaaattt gttttttttc ttgcttttta aaagttctag ttgcattgta
841 tttatcgttg agcgatacat gcaatgacaa atgaatcaaa tttcggtatt atcaatttta
901 ttgctgacat gtgatacata aaggggacag atgtcacaga ctggctttta cgtcagatag
961 ttgggattga ttaacatatt tttcacctcc ccattttgct tcaccatttt attgatccag
1021 ctatatcttg tctggataca taaaaaggtt tgaattgtcg tctttgtttt tagcagtaag
1081 ctcaaagatc atatcccgca tgcggctcaa ctctttcaat tctcctttca ttctttcaat
1141 atttttctct ttctctgata tggtttgctc atacgtatgt agcatatgcg ccagttgttg
1201 aatttcttgc ttaagcgcag atatatcgct ttgatttgct tctatctctg cattcttttt
1261 ttctaaaatc tgttcttttt tactaagaga atctttcatt ttttgcaaaa gtttacttaa
1321 ttcgtgattt ttattgccca tatctgtagc tttggcttca gcggttaaac gttcgttatc
1381 taattccttg acttttttac tcaatacatc aattttattg ttactagttt ccaattcttt
1441 cgtacattgt gttaattttt cacttaaatc ttccaaattt attgactttt cttttacaat
1501 ttttttcaag gattcaattt cttgtttttt tataagaagc gcttttttgg attgatcttc
1561 catctcgcta agctttctcg ttaatataga tttttcagct tttgttcctt ctaaacactg
1621 ctgggtgtca aataataact gatgtaatct actagactca gctaccactt gcgctaatct
1681 gtgttgaaga ctggtagcat gattattcgc tgcctctata cttgattgca tcgctctttc
1741 agaatgtctc attgttgcta acttatattc gtataattcc atcaccgcag atgttggaat
1801 atcacttatt tgattcgatt cgaaagctga cttgagctta gccaaaaatg tatcgagacg
1861 ttcttcctgt gcgatggaaa ataatggcgc cagttcgttc ccagtataat tcagggacgc
1921 tttattcgag acttccaata tgttactgtt ggtactctga accagtatta atggttctaa
1981 ttctttcata caaagtgcca ctgcggaaac acattcttgt ggaaatccaa tcgatgatgt
2041 aagttgcaaa actttctgct taacttcccc atcaccagtg aacaatgcta gcgctattat
2101 catctgtact tgtttcctac tgagcaattc ggagtacagt gttaaccagt tggaatgatt
2161 cgctgccaag tctgccgtca aagctaaggc gtgaacataa agattggtag aagtattctg
2221 gataaaattg ccggtccaat ctccagcggc ggaaaattca ttgtttagca cgtgactaaa
2281 cagtttgcgc attgcatgtt cgctaaacga ctgcataatc ttctttttca gtgcagggat
2341 tttaatcatt tcttgaaata gttgcatcaa ttcagcctgt tttgtttcca
//