LOCUS LJ621088 1689 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67091.graph_c0_seq3.
ACCESSION LJ621088
VERSION LJ621088.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1689)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1689
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67091.graph_c0_seq3"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 524 a 286 c 297 g 582 t
ORIGIN
1 cttggatgtc cgtcttcacc tctctaccta tatgggccat cgctattacg cagtgcggtc
61 agtcttgggc cttctacact ctcctgaccg agctgccgac gtatatggat aaaattttgc
121 atctcaatgt acaacaaaat gcgttccttt cggcgttacc ttacctaagc gcttggctag
181 tgggtctttg tatctcgagc ttcgcagacg cgctcctcgc tcgtcgtttg atctcacctc
241 tggcttcttt taaactatgg aacactgtag cctctttagg gcccagtctc agttttgtcg
301 gtgctatctg ggctggatgc gatcgtatga cggtgatgct gatgcttgcc ggattcggtt
361 ctcttcaggg cgccgtatat gccggaaatc agatgaatca catcgcattg gcaccacgtt
421 acgcgggcac tttatacgga ttgacgaatg ctgcggcgaa cgcttgtggt ttcttggcac
481 cgtatgttat tggcagtata gtggagggac acgaaactct cgcacgatgg cacatagttt
541 tctggatggc agcgggaata aatatggcta ctaattgctt ctacttgatg tttgcgtccg
601 ccactgaaca accatggagc aaaggcggta gttgatgaca atgtcgcatt agaaatgcga
661 tattaaacgt ggaaaataat atacttttca atcatgttgc acatagcaca ttttaatttg
721 gctagctagt tttattataa ttcaataatt gattacttca ttattaatca ttattttgga
781 aaataatttg ttaaaaattt gttttttttc ttgcttttta aaagttctag ttgcattgta
841 tttatcgttg agcgatacat gcaatgacaa atgaatcaaa tttcggtatt atcaatttta
901 ttgctgacat gtgatacata aaggggacag atgtcacaga ctggctttta cgtcagatag
961 ttgggattga ttaacatatt tttcacctcc ccattttgct tcaccatttt attgatccag
1021 ctatatcttg tctggataca taaaaaggtc tgcaatccca taaagaaatt gagtaagtaa
1081 aaacgcaagt atattgacat tatatacaga gtgttctcag tggtacaaac cgaaaagatg
1141 attgtaaatc aagaatgtat agaatataga gtaaaatgtc gagaatagag taaaatgttt
1201 gcaggatttt gttttcaaag aaataatctc aaagacagga caattaataa tattcttgta
1261 cttttttcca tgaataattt gaaacatcat ataaatttat cttaactata gttatcaata
1321 cataaataaa aaaaacattc cattttttaa taaaaacgat aataacaatt actttaaaaa
1381 tcatatgaaa aatattgata ttacttttat ttcttcatta gaatgttttt tttatgcaag
1441 tgtgataact actttcgaga taatttgata atttttataa tacaagattt gcagaaatta
1501 ttcaaaaaaa agtatataga tatttatgtt caaaatttaa aaattttaat attaacttta
1561 aaaaaaaaga tgaaaatatt ctattctgca tcttcgattt atttttacgt atagagtttt
1621 tttgtactag ttaaaaacac tttgtttatg tagcatttaa ttttacagat acacacacac
1681 acacacaca
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