LOCUS LJ619621 1824 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66488.graph_c0_seq1.
ACCESSION LJ619621
VERSION LJ619621.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1824)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1824
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66488.graph_c0_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 626 a 303 c 281 g 614 t
ORIGIN
1 tgcagtggta tcaacgcatt tttcgatggt atttcgagga gcaacaattt catcacatcg
61 tattcagttg gatccatctt gtcaattagc ggactaatgt cggataacaa cgcctgtttg
121 gttcacaact gcagacaatc agattgcaag cacgacgcat tgaagcacag gcacatattt
181 gaggagagaa aaagaaaatc gcgaaatgac gaaggagtcg aggaagatga atacgtcgac
241 gagaagagag cggagtgtga caatgtcaag acgaccgtaa ccacgtgtac ctgtaatctg
301 cagcttggtg tctcaaatct ggataatact tgatgttaaa gcatgacaaa gtctttaaca
361 tgtggtgtat tcttagtgca atataatgta aaaagggaat gcagcattca caaatttttc
421 tctaataatt aattcaatta acgacaaatg catatacata tgtatgttgc aagacaaagc
481 acaaaatgga taaatagttt agctgagcta ttcttgtgtt aagagatgtg aagttggatt
541 aaagttacaa actcgctagg aaaacgtata tataatatct tcaattcaac aattgagtaa
601 gcagtgaaat gactatacat tttaatgtgt ctatattata tattttaatt tactggcgta
661 aacgtataat aatatttata atgaaaattg ccttttaatc ctctttctaa tgtttttttc
721 tattatagct gcttgattta atcgatacat cgtgtgatcg atttaatcga tacaggcgtg
781 ttttataaac ttttactttt tatattgatc tattttctta aaatgagtta acgcaattaa
841 tatttgtatt aagctcgcta tgaagcagga acagaaagat ctcttttgtc aagcagcagt
901 ctttgattga ttggcggaca tgcaagacca catgtcatag ccagacgcga catttattcg
961 cttttaaaat catacaaaat agtttgtatc cttcttacaa ttccctcacc gatttcatcc
1021 cccttccccc tgtacactct tctgcatttc ttcagtctac aaattgttct tcgaatcttc
1081 cccgtccacg tgtcaaaatt ttgacacatt ctaaattccc agcacatatg aatccacacg
1141 gcagtacatt ttagccattg ctaattattc ttagcaattg atcgcgaaca ggactttgtt
1201 gtaactacgt tttaattcca aaaatcacta aaaaattacc aagttgtaaa ttatagacgt
1261 taaacctgca tcaagattaa tacaatttgt taacctccca cgcgattgtt ctaaattttc
1321 aagaaacaat tattcttact aagtaagtat gagctaaatt aacaaatcta agatgtgcaa
1381 ttcttaaaaa ttcaggaact taatacagac aaatactgag aaactggttc ttacatatat
1441 atatatttat agcgttatac acatatattt aaccaataaa agtaatttat taagtagtac
1501 cttcctatat tattttattg tgatacagca ttagcttatt taatattaag ttatttataa
1561 aataatttta atgatataat tataaaattt ttgcgtatta ttttttaatt ttttgcaata
1621 cataaaaatt gcagaacatc ttggacttac cgtttacgat ttttttatag gtcccttttg
1681 aagacatcaa ttaatttaac cagactattt aaatgttgtg tgatccatca catctccatt
1741 atcgggggaa ctaaactttc taattaatta aattttgata tggatgcaga gcagaccact
1801 agtagcaaaa aaaaaaaaaa aaaa
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