LOCUS LJ618382 3816 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq11.
ACCESSION LJ618382
VERSION LJ618382.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3816)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3816
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq11"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1381 a 606 c 553 g 1276 t
ORIGIN
1 gtacatgggg agcccgtgac gtctataaaa cagaaaattg aaccaaaggc atcaacgatc
61 ttgtgttatc ggtctccgcg tgagaagcga tggaaattat caaaagttcc gcgacgagta
121 tcgaaaagta cgaatgatat tggcgattcg ttcaaaggat ctacgatcag gaaaagaagt
181 aaagcttaca agcctagcaa cagatgcgaa ggtaaaggta ctaatattgc catggaacaa
241 cggctgcaat ggatttctaa agtgagagat ttgctaagcg cacaatcaac aacaattcaa
301 aaaattaagg atatagatac tataaaagaa tggagacgtg acaaacgaag tttcaataaa
361 agcatggaga aaatatcgag acgaaatgaa gatattccat ttgcaatcga tattgaagat
421 taccctgcaa tacgaaaacg ttcacaaaaa gtggaagatt atgcagataa tcagaaacag
481 gaaagattaa aatcagtaaa tataaatcag aagattcaag aattatcagg attcctgaaa
541 acacttgaaa ttacaaaatc tttcgaaata ttgacgccaa aatctaaaca aaaatatctt
601 caaactgaaa ttgaaaagct ctcgcatttt caaaaggaag taaataatct aaaaagatat
661 aatgaaatta tatcagctcc aataaattct tcaaataatt cattttaatg ttttttttta
721 tttgatttta ttttttgtca agattttaaa attaggaaaa actcgatatc agtctcttga
781 agtatttatt taaataaaac ttatgtgtat tacaatatta atttcatgca gagttttcat
841 aacatatgtc aagataatcg gaaaggaaat atttttcatg catagtaaaa aaaattaaca
901 attaaaattc tatagatata tcagatacat atcaaatatt gttagatatg tacagaaagt
961 aaataatcaa tgataaaatg agataaagtt aggaaagata gatttttcta agatatgtgt
1021 aagagttgtt aaaataattt cgttaaaaaa atgtcctttc cagttttctt gccagtgcat
1081 tcgattcttg tttttacttc atcatcggat attttcagta taaaaattct aaaagcaatt
1141 actaccaaaa tacaaaaagt aaaatctagc atataaatct gtgcaaccac gaacattgat
1201 tttccttttg tacatggcac tcaatgaagc tttgtagtaa ggaggtacta cacagaattc
1261 tcatagaaaa ctattttaaa taccatagta agttactgta ttactatgta tcagtatcga
1321 gatatacaat atagatataa ggcaaataat ctatataagg ttttttatga ccttttcata
1381 atcttacaag ttatttgttg tattaattct atatacttca tacattaata catgtattta
1441 atttgtgcag ttaatggtga atttgttcat accttcacag aaacataata agtaatatca
1501 ctcaaatatt tcttacatat aaaatgcacg ttattgttct cattacatta cgtttccaac
1561 gttttgtatt cactcattgt acaatattaa cataaaattt aacataaaaa tttttttctc
1621 ttaccaatta atatacattc tacattattt catagtgcat tttcaacttt tgtttaatta
1681 aagtaatatt tgtatggaat aattaatgta gaaaagaaca tttaattata tattttgctt
1741 atgtccaata ataatggatt acaaagtaat ttttttatgc aaatgtttta catatcacat
1801 ttcgtagttt cattcattac ataagatatt atatacgtat atacataaaa atcaactcta
1861 gagccaatcg agataattca aaataaaaac tatgtatgtg aatttatata catacacata
1921 aaacctaggt aaatcttact gctgaaaatt tcaatatata ttacaagttt gtaattgagc
1981 agtaaacact acaaaatcta gtcatacata atatacatct aattatcata tatagattag
2041 aactacatat ttaatatcta aatcataatt tttcacactc atttcttaca ttcgtttaaa
2101 agaaagtttt aaaacgctta aaagaaagtg cgcttcaaaa ctgtattcag tcattcttat
2161 gtatcatttt gataagaaaa tactttaata aatttgaaaa tttaacgatt tattaatgaa
2221 cacactggca tttcatcaca catatattaa gaatttaata tatgtaccat gtttaagaat
2281 tccaaccaga tttaaaccaa tttagtatta caaagctata tggtatatgc cacaataata
2341 ttacatatag cagtaatatc atgtacgtat aattgttaat aaagtaatga ttgtaattta
2401 tgttatacta aaagacgatt gatttgatta ttaatctctg atctgattat taatctattt
2461 ttaacaaaaa aattgttgat agaaattaac agattaaaaa ttaatagtaa ttatgtgtta
2521 tatatacaca tgtatacact tgtatcaaat acatttaaag acctcgatat taagtaacat
2581 tatttctaat atgtttcgaa tatattagag ataatgttac agatgttttc gatcggctat
2641 tttcaaaaaa gtccactttt aacttgtcgc attggcatgt ttatattttt taaaatcttg
2701 attaaaggcg tcagttttat tactagcttc tgcgttttga gggctatcct aagaaatcat
2761 cgttttccta ggagatggtc caagcaagta tactttgttg acgaggatca ttggagcatt
2821 gattctctgt tagaaacttc tacacatagt tttaatttca ggatattcct cgtgtgccgg
2881 atttaaatca acgaaaccta gtttgccata aaattcgtga gattccttat ccgttgataa
2941 catcgtcgtg tgcactccga aagaaccatt tgctcttaaa gctgcaagaa cgcaggttat
3001 taaacgttta caaatagact gatctgtcac acttgatagt acagtgcata caagtttcga
3061 cggatgctgt ctgcacaatt gttccgacac gtccggaata aatgaatgga aatattgtat
3121 ggcatcttga acattttgtg gcaactcgct aatactatta tctaagggat atttcattcg
3181 taattcagga atccaggaaa cagccatttt ctgattgtga gattttatat tcagtgtagc
3241 caatgcgtaa cctgctatac cattttcatc ctcaacaacc atacataact ctggactcaa
3301 tgttagaaat cctccgataa gtttgtctgc tacagctgac gaagttgtac agttattaac
3361 ttgattgcat accgcataaa ccgcttcttc atcactcggt acatacggtc gaattgtata
3421 tattttacta ctgggcactt ccggtgcttt atagacgaat aagtcgttgc cactgtcaac
3481 tgggattaat ctctgtaaat cagccgtaag tccaccacgg aaaacccagg gttcctgttc
3541 tccactcata aatgtttctt tccaaccatt tgaaaaccat gtgtagctgc cctgggtaaa
3601 cgtcgtcatc gtcgctggga atctgccaaa cgccagccac ttcacgtaac tatttagaag
3661 agacacaact cccctcatat cccatacata cgcatacaga tcgtatagca actcgcgatt
3721 attacagtat gtgagccttt ggaataatct atttacccca ttacacatgt cgtttaattt
3781 agctgcacga agatgccatt cttcaatgtc tgatgc
//