LOCUS LJ618380 3544 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq9.
ACCESSION LJ618380
VERSION LJ618380.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3544)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3544
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq9"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1282 a 555 c 487 g 1220 t
ORIGIN
1 gtaaacaata cacatgaatt gttatataat atgcagggat atagatacta taaaagaatg
61 gagacgtgac aaacgaagtt tcaataaaag catggagaaa atatcgagac gaaatgaaga
121 tattccattt gcaatcgata ttgaagatta ccctgcaata cgaaaacgtt cacaaaaagt
181 ggaagattat gcagataatc agaaacagga aagattaaaa tcagtaaata taaatcagaa
241 gattcaagaa ttatcaggat tcctgaaaac acttgaaatt acaaaatctt tcgaaatatt
301 gacgccaaaa tctaaacaaa aatatcttca aactgaaatt gaaaagctct cgcattttca
361 aaaggaagta aataatctaa aaagatataa tgaaattata tcagctccaa taaattcttc
421 aaataattca ttttaatgtt tttttttatt tgattttatt ttttgtcaag attttaaaat
481 taggaaaaac tcgatatcag tctcttgaag tatttattta aataaaactt atgtgtatta
541 caatattaat ttcatgcaga gttttcataa catatgtcaa gataatcgga aaggaaatat
601 ttttcatgca tagtaaaaaa aattaacaat taaaattcta tagatatatc agatacatat
661 caaatattgt tagatatgta cagaaagtaa ataatcaatg ataaaatgag ataaagttag
721 gaaagataga tttttctaag atatgtgtaa gagttgttaa aataatttcg ttaaaaaaat
781 gtcctttcca gttttcttgc cagtgcattc gattcttgtt tttacttcat catcggatat
841 tttcagtata aaaattctaa aagcaattac taccaaaata caaaaagtaa aatctagcat
901 ataaatctgt gcaaccacga acattgattt tccttttgta catggcactc aatgaagctt
961 tgtagtaagg aggtactaca cagaattctc atagaaaact attttaaata ccatagtaag
1021 ttactgtatt actatgtatc agtatcgaga tatacaatat agatataagg caaataatct
1081 atataaggtt ttttatgacc ttttcataat cttacaagtt atttgttgta ttaattctat
1141 atacttcata cattaataca tgtatttaat ttgtgcagtt aatggtgaat ttgttcatac
1201 cttcacagaa acataataag taatatcact caaatatttc ttacatataa aatgcacgtt
1261 attgttctca ttacattacg tttccaacgt tttgtattca ctcattgtac aatattaaca
1321 taaaatttaa cataaaaatt tttttctctt accaattaat atacattcta cattatttca
1381 tagtgcattt tcaacttttg tttaattaaa gtaatatttg tatggaataa ttaatgtaga
1441 aaagaacatt taattatata ttttgcttat gtccaataat aatggattac aaagtaattt
1501 ttttatgcaa atgttttaca tatcacattt cgtagtttca ttcattacat aagatattat
1561 atacgtatat acataaaaat caactctaga gccaatcgag ataattcaaa ataaaaacta
1621 tgtatgtgaa tttatataca tacacataaa acctaggtaa atcttactgc tgaaaatttc
1681 aatatatatt acaagtttgt aattgagcag taaacactac aaaatctagt catacataat
1741 atacatctaa ttatcatata tagattagaa ctacatattt aatatctaaa tcataatttt
1801 tcacactcat ttcttacatt cgtttaaaag aaagttttaa aacgcttaaa agaaagtgcg
1861 cttcaaaact gtattcagtc attcttatgt atcattttga taagaaaata ctttaataaa
1921 tttgaaaatt taacgattta ttaatgaaca cactggcatt tcatcacaca tatattaaga
1981 atttaatata tgtaccatgt ttaagaattc caaccagatt taaaccaatt tagtattaca
2041 aagctatatg gtatatgcca caataatatt acatatagca gtaatatcat gtacgtataa
2101 ttgttaataa agtaatgatt gtaatttatg ttatactaaa agacgattga tttgattatt
2161 aatctctgat ctgattatta atctattttt aacaaaaaaa ttgttgatag aaattaacag
2221 attaaaaatt aatagtaatt atgtgttata tatacacatg tatacacttg tatcaaatac
2281 atttaaagac ctcgatatta agtaacatta tttctaatat gtttcgaata tattagagat
2341 aatgttacag atgttttcga tcggctattt tcaaaaaagt ccacttttaa cttgtcgcat
2401 tggcatgttt atatttttta aaatcttgat taaaggcgtc agttttatta ctagcttctg
2461 cgttttgagg gctatcctaa gaaatcatcg ttttcctagg agatggtcca agcaagtata
2521 ctttgttgac gaggatcatt ggagcattga ttctctgtta gaaacttcta cacatagttt
2581 taatttcagg atattcctcg tgtgccggat ttaaatcaac gaaacctagt ttgccataaa
2641 attcgtgaga ttccttatcc gttgataaca tcgtcgtgtg cactccgaaa gaaccatttg
2701 ctcttaaagc tgcaagaacg caggttatta aacgtttaca aatagactga tctgtcacac
2761 ttgatagtac agtgcataca agtttcgacg gatgctgtct gcacaattgt tccgacacgt
2821 ccggaataaa tgaatggaaa tattgtatgg catcttgaac attttgtggc aactcgctaa
2881 tactattatc taagggatat ttcattcgta attcaggaat ccaggaaaca gccattttct
2941 gattgtgaga ttttatattc agtgtagcca atgcgtaacc tgctatacca ttttcatcct
3001 caacaaccat acataactct ggactcaatg ttagaaatcc tccgataagt ttgtctgcta
3061 cagctgacga agttgtacag ttattaactt gattgcatac cgcataaacc gcttcttcat
3121 cactcggtac atacggtcga attgtatata ttttactact gggcacttcc ggtgctttat
3181 agacgaataa gtcgttgcca ctgtcaactg ggattaatct ctgtaaatca gccgtaagtc
3241 caccacggaa aacccagggt tcctgttctc cactcataaa tgtttctttc caaccatttg
3301 aaaaccatgt gtagctgccc tgggtaaacg tcgtcatcgt cgctgggaat ctgccaaacg
3361 ccagccactt cacgtaacta tttagaagag acacaactcc cctcatatcc catacatacg
3421 catacagatc gtatagcaac tcgcgattat tacagtatgt gagcctttgg aataatctat
3481 ttaccccatt acacatgtcg tttaatttag ctgcacgaag atgccattct tcaatgtctg
3541 atgc
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