LOCUS LJ618378 3423 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq7.
ACCESSION LJ618378
VERSION LJ618378.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3423)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3423
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq7"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1225 a 535 c 460 g 1203 t
ORIGIN
1 tatacatatt atgtttgaaa atattggaaa atcaatgaga atttttttta cttaatctag
61 gaagattatg cagataatca gaaacaggaa agattaaaat cagtaaatat aaatcagaag
121 attcaagaat tatcaggatt cctgaaaaca cttgaaatta caaaatcttt cgaaatattg
181 acgccaaaat ctaaacaaaa atatcttcaa actgaaattg aaaagctctc gcattttcaa
241 aaggaagtaa ataatctaaa aagatataat gaaattatat cagctccaat aaattcttca
301 aataattcat tttaatgttt ttttttattt gattttattt tttgtcaaga ttttaaaatt
361 aggaaaaact cgatatcagt ctcttgaagt atttatttaa ataaaactta tgtgtattac
421 aatattaatt tcatgcagag ttttcataac atatgtcaag ataatcggaa aggaaatatt
481 tttcatgcat agtaaaaaaa attaacaatt aaaattctat agatatatca gatacatatc
541 aaatattgtt agatatgtac agaaagtaaa taatcaatga taaaatgaga taaagttagg
601 aaagatagat ttttctaaga tatgtgtaag agttgttaaa ataatttcgt taaaaaaatg
661 tcctttccag ttttcttgcc agtgcattcg attcttgttt ttacttcatc atcggatatt
721 ttcagtataa aaattctaaa agcaattact accaaaatac aaaaagtaaa atctagcata
781 taaatctgtg caaccacgaa cattgatttt ccttttgtac atggcactca atgaagcttt
841 gtagtaagga ggtactacac agaattctca tagaaaacta ttttaaatac catagtaagt
901 tactgtatta ctatgtatca gtatcgagat atacaatata gatataaggc aaataatcta
961 tataaggttt tttatgacct tttcataatc ttacaagtta tttgttgtat taattctata
1021 tacttcatac attaatacat gtatttaatt tgtgcagtta atggtgaatt tgttcatacc
1081 ttcacagaaa cataataagt aatatcactc aaatatttct tacatataaa atgcacgtta
1141 ttgttctcat tacattacgt ttccaacgtt ttgtattcac tcattgtaca atattaacat
1201 aaaatttaac ataaaaattt ttttctctta ccaattaata tacattctac attatttcat
1261 agtgcatttt caacttttgt ttaattaaag taatatttgt atggaataat taatgtagaa
1321 aagaacattt aattatatat tttgcttatg tccaataata atggattaca aagtaatttt
1381 tttatgcaaa tgttttacat atcacatttc gtagtttcat tcattacata agatattata
1441 tacgtatata cataaaaatc aactctagag ccaatcgaga taattcaaaa taaaaactat
1501 gtatgtgaat ttatatacat acacataaaa cctaggtaaa tcttactgct gaaaatttca
1561 atatatatta caagtttgta attgagcagt aaacactaca aaatctagtc atacataata
1621 tacatctaat tatcatatat agattagaac tacatattta atatctaaat cataattttt
1681 cacactcatt tcttacattc gtttaaaaga aagttttaaa acgcttaaaa gaaagtgcgc
1741 ttcaaaactg tattcagtca ttcttatgta tcattttgat aagaaaatac tttaataaat
1801 ttgaaaattt aacgatttat taatgaacac actggcattt catcacacat atattaagaa
1861 tttaatatat gtaccatgtt taagaattcc aaccagattt aaaccaattt agtattacaa
1921 agctatatgg tatatgccac aataatatta catatagcag taatatcatg tacgtataat
1981 tgttaataaa gtaatgattg taatttatgt tatactaaaa gacgattgat ttgattatta
2041 atctctgatc tgattattaa tctattttta acaaaaaaat tgttgataga aattaacaga
2101 ttaaaaatta atagtaatta tgtgttatat atacacatgt atacacttgt atcaaataca
2161 tttaaagacc tcgatattaa gtaacattat ttctaatatg tttcgaatat attagagata
2221 atgttacaga tgttttcgat cggctatttt caaaaaagtc cacttttaac ttgtcgcatt
2281 ggcatgttta tattttttaa aatcttgatt aaaggcgtca gttttattac tagcttctgc
2341 gttttgaggg ctatcctaag aaatcatcgt tttcctagga gatggtccaa gcaagtatac
2401 tttgttgacg aggatcattg gagcattgat tctctgttag aaacttctac acatagtttt
2461 aatttcagga tattcctcgt gtgccggatt taaatcaacg aaacctagtt tgccataaaa
2521 ttcgtgagat tccttatccg ttgataacat cgtcgtgtgc actccgaaag aaccatttgc
2581 tcttaaagct gcaagaacgc aggttattaa acgtttacaa atagactgat ctgtcacact
2641 tgatagtaca gtgcatacaa gtttcgacgg atgctgtctg cacaattgtt ccgacacgtc
2701 cggaataaat gaatggaaat attgtatggc atcttgaaca ttttgtggca actcgctaat
2761 actattatct aagggatatt tcattcgtaa ttcaggaatc caggaaacag ccattttctg
2821 attgtgagat tttatattca gtgtagccaa tgcgtaacct gctataccat tttcatcctc
2881 aacaaccata cataactctg gactcaatgt tagaaatcct ccgataagtt tgtctgctac
2941 agctgacgaa gttgtacagt tattaacttg attgcatacc gcataaaccg cttcttcatc
3001 actcggtaca tacggtcgaa ttgtatatat tttactactg ggcacttccg gtgctttata
3061 gacgaataag tcgttgccac tgtcaactgg gattaatctc tgtaaatcag ccgtaagtcc
3121 accacggaaa acccagggtt cctgttctcc actcataaat gtttctttcc aaccatttga
3181 aaaccatgtg tagctgccct gggtaaacgt cgtcatcgtc gctgggaatc tgccaaacgc
3241 cagccacttc acgtaactat ttagaagaga cacaactccc ctcatatccc atacatacgc
3301 atacagatcg tatagcaact cgcgattatt acagtatgtg agcctttgga ataatctatt
3361 taccccatta cacatgtcgt ttaatttagc tgcacgaaga tgccattctt caatgtctga
3421 tgc
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