LOCUS LJ618376 3064 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c65902.graph_c2_seq5.
ACCESSION LJ618376
VERSION LJ618376.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 3064)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015) to the DDBJ/EMBL/GenBank databases.
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3064
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c65902.graph_c2_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 1063 a 493 c 417 g 1091 t
ORIGIN
1 tttttttttt tttttttcag tctcttgaag tatttattta aataaaactt atgtgtatta
61 caatattaat ttcatgcaga gttttcataa catatgtcaa gataatcgga aaggaaatat
121 ttttcatgca tagtaaaaaa aattaacaat taaaattcta tagatatatc agatacatat
181 caaatattgt tagatatgta cagaaagtaa ataatcaatg ataaaatgag ataaagttag
241 gaaagataga tttttctaag atatgtgtaa gagttgttaa aataatttcg ttaaaaaaat
301 gtcctttcca gttttcttgc cagtgcattc gattcttgtt tttacttcat catcggatat
361 tttcagtata aaaattctaa aagcaattac taccaaaata caaaaagtaa aatctagcat
421 ataaatctgt gcaaccacga acattgattt tccttttgta catggcactc aatgaagctt
481 tgtagtaagg aggtactaca cagaattctc atagaaaact attttaaata ccatagtaag
541 ttactgtatt actatgtatc agtatcgaga tatacaatat agatataagg caaataatct
601 atataaggtt ttttatgacc ttttcataat cttacaagtt atttgttgta ttaattctat
661 atacttcata cattaataca tgtatttaat ttgtgcagtt aatggtgaat ttgttcatac
721 cttcacagaa acataataag taatatcact caaatatttc ttacatataa aatgcacgtt
781 attgttctca ttacattacg tttccaacgt tttgtattca ctcattgtac aatattaaca
841 taaaatttaa cataaaaatt tttttctctt accaattaat atacattcta cattatttca
901 tagtgcattt tcaacttttg tttaattaaa gtaatatttg tatggaataa ttaatgtaga
961 aaagaacatt taattatata ttttgcttat gtccaataat aatggattac aaagtaattt
1021 ttttatgcaa atgttttaca tatcacattt cgtagtttca ttcattacat aagatattat
1081 atacgtatat acataaaaat caactctaga gccaatcgag ataattcaaa ataaaaacta
1141 tgtatgtgaa tttatataca tacacataaa acctaggtaa atcttactgc tgaaaatttc
1201 aatatatatt acaagtttgt aattgagcag taaacactac aaaatctagt catacataat
1261 atacatctaa ttatcatata tagattagaa ctacatattt aatatctaaa tcataatttt
1321 tcacactcat ttcttacatt cgtttaaaag aaagttttaa aacgcttaaa agaaagtgcg
1381 cttcaaaact gtattcagtc attcttatgt atcattttga taagaaaata ctttaataaa
1441 tttgaaaatt taacgattta ttaatgaaca cactggcatt tcatcacaca tatattaaga
1501 atttaatata tgtaccatgt ttaagaattc caaccagatt taaaccaatt tagtattaca
1561 aagctatatg gtatatgcca caataatatt acatatagca gtaatatcat gtacgtataa
1621 ttgttaataa agtaatgatt gtaatttatg ttatactaaa agacgattga tttgattatt
1681 aatctctgat ctgattatta atctattttt aacaaaaaaa ttgttgatag aaattaacag
1741 attaaaaatt aatagtaatt atgtgttata tatacacatg tatacacttg tatcaaatac
1801 atttaaagac ctcgatatta agtaacatta tttctaatat gtttcgaata tattagagat
1861 aatgttacag atgttttcga tcggctattt tcaaaaaagt ccacttttaa cttgtcgcat
1921 tggcatgttt atatttttta aaatcttgat taaaggcgtc agttttatta ctagcttctg
1981 cgttttgagg gctatcctaa gaaatcatcg ttttcctagg agatggtcca agcaagtata
2041 ctttgttgac gaggatcatt ggagcattga ttctctgtta gaaacttcta cacatagttt
2101 taatttcagg atattcctcg tgtgccggat ttaaatcaac gaaacctagt ttgccataaa
2161 attcgtgaga ttccttatcc gttgataaca tcgtcgtgtg cactccgaaa gaaccatttg
2221 ctcttaaagc tgcaagaacg caggttatta aacgtttaca aatagactga tctgtcacac
2281 ttgatagtac agtgcataca agtttcgacg gatgctgtct gcacaattgt tccgacacgt
2341 ccggaataaa tgaatggaaa tattgtatgg catcttgaac attttgtggc aactcgctaa
2401 tactattatc taagggatat ttcattcgta attcaggaat ccaggaaaca gccattttct
2461 gattgtgaga ttttatattc agtgtagcca atgcgtaacc tgctatacca ttttcatcct
2521 caacaaccat acataactct ggactcaatg ttagaaatcc tccgataagt ttgtctgcta
2581 cagctgacga agttgtacag ttattaactt gattgcatac cgcataaacc gcttcttcat
2641 cactcggtac atacggtcga attgtatata ttttactact gggcacttcc ggtgctttat
2701 agacgaataa gtcgttgcca ctgtcaactg ggattaatct ctgtaaatca gccgtaagtc
2761 caccacggaa aacccagggt tcctgttctc cactcataaa tgtttctttc caaccatttg
2821 aaaaccatgt gtagctgccc tgggtaaacg tcgtcatcgt cgctgggaat ctgccaaacg
2881 ccagccactt cacgtaacta tttagaagag acacaactcc cctcatatcc catacatacg
2941 catacagatc gtatagcaac tcgcgattat tacagtatgt gagcctttgg aataatctat
3001 ttaccccatt acacatgtcg tttaatttag ctgcacgaag atgccattct tcaatgtctg
3061 atgc
//